From: Simon Whitehead (
Date: Mon Dec 12 2005 - 12:19:30 CST

Dear vmd users,

I would like to produce a cross correlation map from my trajectory data and was wondering if you think it would be possible to produce a script which calculates a cross correlation coefficient matix using say the time 0 frame as a reference to calculate the vectors for each atom?

Many thanks in advance

simon whitehead