VMD-L Mailing List

From: Michel Espinoza-Fonseca (mef_at_ddt.biochem.umn.edu)
Date: Fri Oct 21 2005 - 10:46:46 CDT

...If you're using Autodock, you can easily load the .dlg file into vmd and open it as "pdb" file. You'll see the calculated orientations along the time bar...

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From: owner-vmd-l_at_ks.uiuc.edu on behalf of Björn Windshügel
Sent: Fri 10/21/2005 9:54 AM
To: vmd-l_at_ks.uiuc.edu
Subject: vmd-l: Loading multiple molecules in one step / "Apply changes automatically"

Hi everybody,

can anyone tell me if there is a possibility in VMD to load more than one
molecule in a step? When analysing docking results it sucks loading 40 docked
conformations using the standard procedure. It would be nice having the
possibility to load the content of a whole directory or to select several
files at once for example by using the Shift or Strg Key.

Another observation is that having done a selection for a trajectory using the
command "within 5 of resid 333" and having clicked "Apply changes
automatically" I always have to click the "Apply" button when watching
another frame since the changes are not done automatically. In a previous
version of VMD (1.6 or so) this worked fine.

Best regards,

Björn 

--
Björn Windshügel
Institut für Pharmazeutische Chemie             phone:  (49)345 55-25043
Martin-Luther-Universität Halle-Wittenberg      fax:    (49)345 55-27355
Wolfgang-Langenbeck-Strasse 4                   web:    www.drugdesigner.de
06114 Halle (Saale)