VMD-L Mailing List

From: Claire Zerafa (cporteli_at_waldonet.net.mt)
Date: Wed Sep 07 2005 - 16:02:25 CDT

----- Original Message -----
From: "Claire Zerafa" <cporteli_at_waldonet.net.mt>
To: "'vmd list'" <vmd-l_at_ks.uiuc.edu>
Sent: Wednesday, September 07, 2005 3:00 PM
Subject: vmd-l: visualising bonds in vmd

> Hi all,
>
> I am working with a protein (androgen receptor) ligand (steroidal & non
> steroidal) complex. I have done some dynamics, and i want now to visualise
> how bond formation with the ligand varies over time. I guess I should be
> able to see this in vmd, in fact I can see the entire system move, but i
> now want to focus on protein ligand interactions. How can I do this
> please?
>
> claire