VMD-L Mailing List

From: Luis Gracia (lug2002_at_med.cornell.edu)
Date: Tue Aug 16 2005 - 20:20:00 CDT

Hi, the rmsdtt plugin does that:

http://physiology.med.cornell.edu/faculty/hweinstein/vmdplugins/rmsdtt/

Best,
Luis

Luis Gracia, PhD
Department of Physiology & Biophysics
Weill Medical College of Cornell University
1300 York Avenue, Box 75
New York, NY 10021

Tel: (212) 746-6375
Fax: (212) 746-8690
lug2002_at_med.cornell.edu

Jerry Parks said the following on 08/16/05 18:08:
> Hello,
>
> Does anyone have a script that will compute the RMSD for a trajectory (dcd
> + psf files) relative to a pdb file of the same molecule?
>
> Thanks in advance,
> Jerry