VMD-L Mailing List

From: Luis Gracia (lug2002_at_med.cornell.edu)
Date: Mon Apr 04 2005 - 22:08:24 CDT

Are the atom in the pdb file HETATM or ATOM?
Luis

Luis Rosales said the following on 04/04/05 21:05:

>Hi,
>
>I am trying to visualize a cyclic peptide (cyclotide), however I found that
>VMD does not recognize it as a protein. So I am unable to see the ribbons and
>the trace representations. I checked the PDB file and it does look like a
>normal PDB NMR-determined file...
>
>I believe that the problem could be on the extra C-term N-term bond.
>Any ideas about how can this problem be solved??
>
>Thanks,
>
>Luis
>
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