VMD-L Mailing List

From: Luis Rosales (ludwig_at_correo.biomedicas.unam.mx)
Date: Mon Apr 04 2005 - 20:05:33 CDT

Hi,

I am trying to visualize a cyclic peptide (cyclotide), however I found that
VMD does not recognize it as a protein. So I am unable to see the ribbons and
the trace representations. I checked the PDB file and it does look like a
normal PDB NMR-determined file...

I believe that the problem could be on the extra C-term N-term bond.
Any ideas about how can this problem be solved??

Thanks,

Luis 

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