VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Mar 18 2005 - 10:52:52 CST

Huizhe,
  What's giving you that warning? It sounds like some sort of
X windows ssh tunnel, make sure your DISPLAY environment
variable is set to :0.0 and you're running VMD as the same user
you've run X as.

  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Mar 18, 2005 at 08:38:30AM -0800, HuiZhe Li wrote:
> Hi John,
>
> is this warning critical?
>
> Warning: Tried to connect to session manager,
> Authentication Rejected, reason : None of the
> authentication protocols specified are supported and
> host-based authentication failed
>
> I can use vmd but it gives this warning in the term
> when i start vmd.
>
> Huizhe
>
>
> --- John Stone <johns_at_ks.uiuc.edu> wrote:
>
> >
> > That's good to know, thanks for the information, it
> > will help
> > others that encounter the same problem.
> >
> > John Stone
> > vmd_at_ks.uiuc.edu
> >
> > On Fri, Mar 18, 2005 at 01:00:00AM -0800, HuiZhe Li
> > wrote:
> > > Hi John, I grabbed a copy of libstdc++.so.5.0.3
> > from
> > > RHEL3 on another machine and then made a symbolink
> > > (libstdc++.so.5) to it and then vmd just worked!
> > >
> > > Thanks a lot for your help!
> > >
> > > --- John Stone <johns_at_ks.uiuc.edu> wrote:
> > >
> > > >
> > > > Ah, ok, I think you need to install the
> > > > libstdc++.so.5 library,
> > > > which apparently isn't being installed by
> > default
> > > > with RHEL4.
> > > > If you have trouble getting this working, let me
> > > > know and I
> > > > can work something out for you.
> > > >
> > > > John
> > > >
> > > > On Thu, Mar 17, 2005 at 09:50:29PM -0800, HuiZhe
> > Li
> > > > wrote:
> > > > > HI john i kind of mixed message to you and to
> > > > dallas.
> > > > >
> > > > > after i typed the command
> > > > > vmd -dispdev text
> > > > >
> > > > > i got the following msg:
> > > > >
> > > > > /usr/local/apps/vmd/vmd_LINUX: error while
> > loading
> > > > > shared libraries: libstdc++.so.5: cannot open
> > > > shared
> > > > > object file: No such file or directory
> > > > >
> > > > > i am using tcsh. i think it is properly
> > installed
> > > > > because i have not run into problems with
> > other
> > > > > problems or shell commands...
> > > > >
> > > > > huizhe
> > > > >
> > > > > --- John Stone <johns_at_ks.uiuc.edu> wrote:
> > > > >
> > > > > >
> > > > > > Hi,
> > > > > > It shouldn't be possible for -dispdev text
> > to
> > > > give
> > > > > > you the
> > > > > > "same symptom", as it should not be
> > attempting
> > > > to
> > > > > > open a separate
> > > > > > terminal window, and thus you should get
> > error
> > > > > > messages in the
> > > > > > window you ran it from. Are you sure you
> > typed
> > > > the
> > > > > > command correctly?
> > > > > > Just to double check, you do have /bin/csh
> > > > installed
> > > > > > right?
> > > > > >
> > > > > > John Stone
> > > > > > vmd_at_ks.uiuc.edu
> > > > > >
> > > > > > On Thu, Mar 17, 2005 at 07:55:12PM -0800,
> > HuiZhe
> > > > Li
> > > > > > wrote:
> > > > > > > Hi John,
> > > > > > >
> > > > > > > Same symptom for vmd -dispdev text as for
> > vmd
> > > > > > >
> > > > > > > below is output from glxinfo command
> > > > > > >
> > -------------------------------------------
> > > > > > > name of display: :0.0
> > > > > > > display: :0 screen: 0
> > > > > > > direct rendering: Yes
> > > > > > > server glx vendor string: NVIDIA
> > Corporation
> > > > > > > server glx version string: 1.3
> > > > > > > server glx extensions:
> > > > > > > GLX_EXT_visual_info,
> > > > GLX_EXT_visual_rating,
> > > > > > > GLX_SGIX_fbconfig,
> > > > > > > GLX_SGIX_pbuffer, GLX_SGI_video_sync,
> > > > > > > GLX_SGI_swap_control,
> > > > > > > GLX_ARB_multisample,
> > GLX_NV_float_buffer
> > > > > > > client glx vendor string: NVIDIA
> > Corporation
> > > > > > > client glx version string: 1.3
> > > > > > > client glx extensions:
> > > > > > > GLX_ARB_get_proc_address,
> > > > GLX_ARB_multisample,
> > > > > > > GLX_EXT_visual_info,
> > > > > > > GLX_EXT_visual_rating,
> > > > GLX_EXT_import_context,
> > > > > > > GLX_SGI_video_sync,
> > > > > > > GLX_NV_swap_group, GLX_NV_video_out,
> > > > > > > GLX_SGIX_fbconfig, GLX_SGIX_pbuffer,
> > > > > > > GLX_SGI_swap_control,
> > GLX_NV_float_buffer
> > > > > > > GLX extensions:
> > > > > > > GLX_EXT_visual_info,
> > > > GLX_EXT_visual_rating,
> > > > > > > GLX_SGIX_fbconfig,
> > > > > > > GLX_SGIX_pbuffer, GLX_SGI_video_sync,
> > > > > > > GLX_SGI_swap_control,
> > > > > > > GLX_ARB_multisample,
> > GLX_NV_float_buffer,
> > > > > > > GLX_ARB_get_proc_address
> > > > > > > OpenGL vendor string: NVIDIA Corporation
> > > > > > > OpenGL renderer string: Quadro FX
> > > > 1400/PCI/SSE2
> > > > > > > OpenGL version string: 1.5.2 NVIDIA 66.29
> > > > > > > OpenGL extensions:
> > > > > > > GL_ARB_depth_texture,
> > > > GL_ARB_fragment_program,
> > > > > > > GL_ARB_fragment_program_shadow,
> > > > > > > GL_ARB_fragment_shader, GL_ARB_imaging,
> > > > > > > GL_ARB_multisample,
> > GL_ARB_multitexture,
> > > > > > > GL_ARB_occlusion_query,
> > > > > > > GL_ARB_point_parameters,
> > > > GL_ARB_point_sprite,
> > > > > > > GL_ARB_shadow,
> > > > > > > GL_ARB_shader_objects,
> > > > > > > GL_ARB_shading_language_100,
> > > > > > > GL_ARB_texture_border_clamp,
> > > > > > > GL_ARB_texture_compression,
> > > > > > > GL_ARB_texture_cube_map,
> > > > > > GL_ARB_texture_env_add,
> > > > > > > GL_ARB_texture_env_combine,
> > > > > > > GL_ARB_texture_env_dot3,
> > > > > > > GL_ARB_texture_mirrored_repeat,
> > > > > > > GL_ARB_texture_non_power_of_two,
> > > > > > > GL_ARB_texture_rectangle,
> > > > > > GL_ARB_transpose_matrix,
> > > > > > > GL_ARB_vertex_buffer_object,
> > > > > > > GL_ARB_vertex_program,
> > GL_ARB_vertex_shader,
> > > > > > > GL_ARB_window_pos,
> > GL_ATI_draw_buffers,
> > > > > > > GL_ATI_texture_float,
> > > > > > > GL_ATI_texture_mirror_once,
> > GL_S3_s3tc,
> > > > > > > GL_EXT_texture_env_add,
> > > > > > > GL_EXT_abgr, GL_EXT_bgra,
> > > > GL_EXT_blend_color,
> > > > > > > GL_EXT_blend_equation_separate,
> > > > > > > GL_EXT_blend_func_separate,
> > > > > > > GL_EXT_blend_minmax,
> > > > GL_EXT_blend_subtract,
> > > > > > > GL_EXT_compiled_vertex_array,
> > > > > > > GL_EXT_Cg_shader,
> > > > GL_EXT_depth_bounds_test,
> > > > > > > GL_EXT_draw_range_elements,
> > > > > > > GL_EXT_fog_coord,
> > > > GL_EXT_multi_draw_arrays,
> > > > > > > GL_EXT_packed_pixels,
> > > > > > > GL_EXT_pixel_buffer_object,
> > > > > > > GL_EXT_point_parameters,
> > > > > > > GL_EXT_rescale_normal,
> > > > GL_EXT_secondary_color,
> > > > > > > GL_EXT_separate_specular_color,
> > > > > > > GL_EXT_shadow_funcs,
> > > > > > > GL_EXT_stencil_two_side,
> > > > GL_EXT_stencil_wrap,
> > > > > > > GL_EXT_texture3D,
> > > > > > > GL_EXT_texture_compression_s3tc,
> > > > > > > GL_EXT_texture_cube_map,
> > > > > > > GL_EXT_texture_edge_clamp,
> > > > > > > GL_EXT_texture_env_combine,
> > > > > > > GL_EXT_texture_env_dot3,
> > > > > > > GL_EXT_texture_filter_anisotropic,
> > > > > > > GL_EXT_texture_lod,
> > > > GL_EXT_texture_lod_bias,
> > > > > > > GL_EXT_texture_mirror_clamp,
> > > > > > > GL_EXT_texture_object,
> > > > GL_EXT_vertex_array,
> > > > > > > GL_HP_occlusion_test,
> >
> === message truncated ===
>
>
> __________________________________________________
> Do You Yahoo!?
> Tired of spam? Yahoo! Mail has the best spam protection around
> http://mail.yahoo.com 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349              
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078