VMD-L Mailing List

From: Peter Holm (peter.holm_at_mbfys.lu.se)
Date: Mon Feb 21 2005 - 07:47:52 CST

Dear list readers,

I have an object created a VMD surface object by the HOLE program suite (http://d2o.biop.ox.ac.uk:38080/).
I would like to visualise certain amino acid residues in a corresponding pdb file in close proximity to the surface produced while keeping residues further away than say 10Å as ribbons or similar clean visualisation. I know how to do the latter in Pymol but I is it possible to convert a HOLE/VMD surface to be read by Pymol or is the problem possible to solve in VMD alone?

Many thanks in advance

Sincerely

Peter

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Peter Holm, Ph.D. Student
Molecular Biophysics
Center for Chemistry and Chemical Engineering
Lund University
P.O.B. 124
SE-22100 Lund
SWEDEN
Lab: +46-(0)46-2221448 Cell: +46-(0)709-625451
Fax: +46-(0)46-2224692 http://www.mbfys.lu.se
E-mail: peter.holm_at_mbfys.lu.se
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