VMD-L Mailing List

From: Laura Lucan (laura.lucan_at_comcast.net)
Date: Thu Nov 11 2004 - 22:04:01 CST

I did, but is so much not working:-(
As long as I keep counting Fe4S4 resp. Fe3S4, I get the same error message.
Is there any other way than atomselect?
Thank you very much for your reply.
Laura.
----- Original Message -----
From: "Luis Gracia" <lug2002_at_med.cornell.edu>
To: "Laura Lucan" <laura.lucan_at_comcast.net>
Cc: <vmd-l_at_ks.uiuc.edu>
Sent: Thursday, November 11, 2004 8:24 PM
Subject: Re: vmd-l: VMD newbie question

> Laura Lucan said the following on 11/11/04 17:18:
>> Hello,
>> I need to align two pdb protein structures upon Fe-S clusters,
>> unfortunately with different number atoms...and of course it's not
>> working :-(
>> Any advice or link to documentation is welcome.
>> Thank you.
>
> Hi,
>
> you could try any other combination of selection that does not rely on
> resid. Like resname, name, type,...
>
> good luck
>
> Luis
>
> --
> Luis Gracia, PhD
> Department of Physiology & Biophysics
> Weill Medical College of Cornell University
> 1300 York Avenue, Box 75
> New York, NY 10021
>
> Tel: (212) 746-6375
> Fax: (212) 746-8690
> lug2002_at_med.cornell.edu
>