VMD-L Mailing List

From: Josh Vermaas (vermaasj_at_msu.edu)
Date: Tue Jan 31 2023 - 09:02:35 CST

Hi Gagan,

How are you doing the coloring? Did you make 7 different
representations, or did you do something else? One thing to check would
be if you have a representation that covers all 7 transmembrane helices.
I have seen instances where different rendering options disagree about
which representation is on "top", and can lead to this sort of behavior.

-Josh

On 1/31/23 6:31 AM, GAGANJYOT KAUR BAKSHI wrote:
> Hii,
>
> I have a protein with 7 transmembranes coloured differently. When i am
> rendering it using Tachyon or povray, the colour of the whole protein
> is same. Its not showing the differently coloured helixes of the protein.
> How can i fix this? Please help.
>
> Thanks ,
> Gagan 

-- 
Josh Vermaas
vermaasj_at_msu.edu
Assistant Professor, Plant Research Laboratory and Biochemistry and Molecular Biology
Michigan State University
vermaaslab.github.io