VMD-L Mailing List
From: Vlad Cojocaru (vlad.cojocaru_at_mpi-muenster.mpg.de)
Date: Sat Mar 19 2016 - 03:34:16 CDT
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Chimera can do that nicely ... the command is "swapna" (see chimera
user guide) .. I don't think VMD can do it (but I may have missed this
feature if it exists)
Best
Vlad
On 03/19/2016 08:32 AM, Kalyanashis Jana wrote:
> Hi,
> I am Kalyanashis Jana, working under Dr. Bishwajit Ganguly,
> CSIR-CSMCRI, Bhavnagar, India. I used the VMD mutation technique for
> protein system. However, it was not working for some specific amino
> acid residues e.g. histidine, selenocysteine. Otherwise, it is an
> excellent platform to mutate protein or enzyme. Now, I would like to
> mutate DNA or RNA i.e. I would like to replace a single/multiple
> nucleobase with other DNA/RNA nucleobase(s). Can you please tell me,
> is it possible to mutate DNA/RNA with VMD?
>
> Looking forward to hear from you positively.
>
> Thanks in advance,
> With best regards
> Kalyanashis Jana
-- Dr. Vlad Cojocaru Computational Structural Biology Laboratory Department of Cell and Developmental Biology Max Planck Institute for Molecular Biomedicine Röntgenstrasse 20, 48149 Münster, Germany Tel: +49-251-70365-324; Fax: +49-251-70365-399 Email: vlad.cojocaru[at]mpi-muenster.mpg.de http://www.mpi-muenster.mpg.de/43241/cojocaru
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