VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Dec 03 2015 - 12:43:51 CST

XML files can contain almost anything, so you'll need to know much
more about what it contains and what variety of XML file it is before
you would be able to convert it. VMD has a couple of molfile plugins
that are able to read structures in XML format, but you might not be
working with one of the XML file types that VMD knows how to read, so
you'll need to provide more info before people can assist you.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Dec 03, 2015 at 01:35:43PM -0500, Abhijit Ghosh wrote:
> I am new to the art of molecular simulations.
> I have one problem - I am trying to convert
> an xml file to a psf file using vmd? Could someone
> please provide me the set of commands to do so?
>
> A Thanks
>
> A Abhijit
> --
> FAILURE IS NOT AN OPTION ! 

-- 
NIH Center for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
http://www.ks.uiuc.edu/~johns/           Phone: 217-244-3349
http://www.ks.uiuc.edu/Research/vmd/