VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Oct 02 2015 - 10:01:04 CDT

Hi,
  There is no "sqlite" command in VMD. The "dmsplugin" by D. E. Shaw Research
is compiled against the sqlite database library, so at runtime, libsqlite.so
is loaded by the dmsplugin code, but VMD itself does not use sqlite.
If you have loaded some external Tcl/Tk package or Python module that
is linked against libsqlite.so, you may have inadvertently created a runtime
conflict between incompatible versions of libsqlite. Did you add some
new plugin to VMD? If not, there should not be an "sqlite" command otherwise.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Oct 02, 2015 at 02:39:08PM +0100, Nuno Sousa Cerqueira wrote:
> Hello to all,
>
>
> I cannot use sqlite with vmd. When the command ???sqlite??? is called in the vmd terminal, vmd crashes. No message is given.
>
> I am having the problem either on version 1.9.1. and 1.9.2.
> The operating system is Mac El Capitan, but I think that in Yosemite I had the same problem too.
>
> Does anyone has the same problem ?
> Any solution ?
>
>
> Kind regards,
>
> Nuno
>
>
> ______________________________________________
>
> Nuno M. F. Sousa A. Cerqueira
> Chemistry Department
> Faculty of Sciences
> University of Porto
> Rua do Campo Alegre, s/n
> 4169-007 Porto
> Portugal
> Tel: +351 220402501
> Fax: +351 220 402 009
> email: nscerque_at_fc.up.pt <mailto:nscerque_at_fc.up.pt>
> website: http://www.fc.up.pt/pessoas/nscerque <http://www.fc.up.pt/pessoas/nscerque> 

-- 
NIH Center for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
http://www.ks.uiuc.edu/~johns/           Phone: 217-244-3349
http://www.ks.uiuc.edu/Research/vmd/