From: John Stone (
Date: Thu Jun 04 2015 - 19:18:46 CDT

  I think the simplest thing would be to use an atom selection to
write a PSF, e.g. after loading your cms file, do this:
  set sel [atomselect top all]
  $sel writepsf newfile.psf

Try that and see if it works for you.

  John Stone

On Wed, Jun 03, 2015 at 03:03:34PM -0500, lecan wrote:
> Hello everybody.
> VMD program now have a plug-in to handle Desmond trajectories. This
> plug-in enable VMD to convert cms files from Desmond (Schrodinger)
> to NAMD dcd files. I wonder if it is possible to generate a PSF file
> for the system displayed on VMD program, and if it is possible, what
> is the way to do it.
> Luis L.

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