From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Thu Jul 10 2014 - 10:51:23 CDT

On Jul 10, 2014 10:37 AM, "Marco Gerolin" <marco.gerolin_at_studenti.unipd.it>
wrote:
>
> Dear VMD users,
> I need to subtract to a trajectory, a reference structure, for each
frame, is this possible in VMD?

Yes. You need to write a custom tcl script though.

>
> PS: Subtract and not align
>
> Thank you
>
> --
> Marco Gerolin
> Dipartimento di Scienze Chimiche
> Università degli Studi di Padova
> Via Marzolo 1, 35131
> Padova