VMD-L Mailing List

From: Brian Bennion (brian_at_youkai.llnl.gov)
Date: Fri Feb 13 2004 - 16:53:24 CST

There are at least two options

First, make a selection in the graphics window
>>>resname XXXXX

and delete the all selection

secondly you could do a selection like

>>>not water

Brian

On Fri, 13 Feb 2004, Bamidele Adisa wrote:

> hi,
> i want to view the trajectory of a phenylacetylene oligomer solvated in a
> box of water.
> but because there are so many water molecules surrounding the oligomer,
> it's almost impossible to see what's
> going on to the oligomer, which is located at the center of the box of water.
> is possible to remove the surrounding water molecules in vmd so i can view
> the oligomer clearly?
> thanks in advance,
> dele
>
> ______________________
> Dept of Chemical Engineering
> Clemson University
> Clemson, SC 29634-0909
> ______________________
>

*****************************************************************
**Brian Bennion, Ph.D. **
**Computational and Systems Biology Division **
**Biology and Biotechnology Research Program **
**Lawrence Livermore National Laboratory **
**P.O. Box 808, L-448 bennion1_at_llnl.gov **
**7000 East Avenue phone: (925) 422-5722 **
**Livermore, CA 94550 fax: (925) 424-6605 **
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