From: Marzieh Dehghan (M_Dehghan_at_ibb.ut.ac.ir)
Date: Sun Aug 11 2013 - 06:53:38 CDT

Hi

after protein- protein docking,I used VMD and detected H-bond and salt
bridge, but I don't know how detect van der waals and covalent, . . .
bonds?

I would like to know, canVMD do this? if yes, how? if no, what software do
you suggest?