VMD-L Mailing List

From: francesco oteri (francesco.oteri_at_gmail.com)
Date: Tue Jan 29 2013 - 09:56:21 CST

Dear vmd developers,
I am facing a problem when running vmd in linux.
I recently installed a python module and correctly updated the PYTHONPATH
environment variable in my .bashrc file.
After this event, I got the error:
Word too long
when I attempted to run vmd.
Looking at the code, I found that the guilty line is
setenv PYTHONPATH ${PYTHONPATH}:${VMDDIR}/scripts/python
in vmd script.

The PYTHONPATH variable before running vmd is:
/ibpc/etna/oteri/PKG/modeller/9.11/modlib:/ibpc/etna/oteri/PKG/modeller/9.11/lib/x86_64-intel8/python2.5:/ibpc/etna/oteri/PKG/networkx/1.6/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/setuptools/0.6c12/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/matplotlib/1.1.0/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/numpy/1.6.2/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/MDAnalysis/0.7.7/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/pupynere/1.0.15/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/modeller/9.11/modlib:/ibpc/etna/oteri/PKG/modeller/9.11/lib/x86_64-intel8/python2.5:/ibpc/etna/oteri/PKG/networkx/1.6/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/setuptools/0.6c12/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/matplotlib/1.1.0/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/numpy/1.6.2/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/MDAnalysis/0.7.7/lib/python2.7/site-packages:/ibpc/etna/oteri/PKG/pupynere/1.0.15/lib/python2.7/site-packages:

Best regards,
Francesco