VMD-L Mailing List
From: Vince Cho (vince_at_fastmail.fm)
Date: Wed Jun 27 2012 - 23:03:54 CDT
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Hello All,
I have a quick question about building a membrane in general.
Apparently, the "membrane builder" module in VMD offers only 2 types of
lipid. CHARMM-GUI offers a bit more, but that's limited to 6 as well.
So, if I want to build a membrane of an arbitrary lipid, what would be
the best way to proceed?
The quick and dirty method would be to start from a PDB file of a single
molecule and make an array of it, but I feel like I will encounter a lot
of bugs this way. Is this how the Membrane Builder module works?
Thanks,
V
- Next message: fariba taghavi: "Re: how to calculate water density in the 'hole'?"
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