VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Tue Oct 21 2003 - 15:54:51 CDT

Ioana,
  Can you send me a copy of the Parm file that yields those errors?
I'm not sure why VMD 1.8 would read it but 1.8.1 does not, may be luck. :-)

Thanks,
  John Stone
  vmd_at_ks.uiuc.edu

On Wed, Oct 15, 2003 at 04:54:58PM -0700, Ioana Cozmuta wrote:
> Hi,
>
> I am trying to load a .prmtop file on top of a pdb file in vmd 1.8.1 and I
> get the following error messages (they were not there in version
> vmd1.8)
> How can I fix this?
>
> Thanks,
> Ioana
>
> Info) Finished with coordinate file test.coor. AMBER 7 parm read error, at
> flag section DIHEDRAL_PERIODICITY,
> expected %FLAG but got %FORMAT(5E16.8) AMBER 7 parm read error, at
> flag section DIHEDRAL_PHASE,
> expected %FLAG but got %FORMAT(5E16.8) AMBER 7 parm read error, at
> flag section SOLTY,
> expected %FLAG but got %FORMAT(5E16.8) 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349              
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