VMD-L Mailing List

From: Ajasja Ljubetič (ajasja.ljubetic_at_gmail.com)
Date: Tue Jan 31 2012 - 08:32:01 CST

Works fine for me on win7 64 bit. Perhaps a screenshot would be useful?

Ajasja
Info) VMD for WIN32, version 1.9.1beta2 (January 25, 2012)
Info) Multithreading available, 6 CPUs detected.
Info) Free system memory: 3225MB (78%)
Info) Creating CUDA device pool and initializing hardware...
Info) Detected 1 available CUDA accelerator:
Info) [0] GeForce GTX 570 15 SM_2.0 @ 1.57 GHz, 1.3GB RAM, KTO, OIO, ZCP
Info) OpenGL renderer: GeForce GTX 570/PCI/SSE2
Info) Features: STENCIL MDE CVA MTX NPOT PP PS GLSL(OVFGS)
Info) Full GLSL rendering mode is available.
Info) Textures: 2-D (16384x16384), 3-D (2048x2048x2048), Multitexture (4)
Info) No joysticks found. Joystick interface disabled.
Info) Dynamically loaded 69 plugins in directory:
Info) C:/Program Files/VMD/plugins/WIN32/molfile

On Tue, Jan 31, 2012 at 14:18, Axel Kohlmeyer <akohlmey_at_gmail.com> wrote:

> On Mon, Jan 30, 2012 at 6:27 AM, thereal sisterdot
> <therealsisterdot_at_gmail.com> wrote:
> > Dear all,
> >
> > i am having trouble seeing structures with the styles NewRibbons
> NewCartoon,
> > while Ribbons and Cartoon seem to work.
> >
> > e.g. for
> > http://www.rcsb.org/pdb/files/3QBF.pdb.gz
> >
> >> mol new 3QBF.pdb
> >> vmd_calculate_structure 0
> >> [atomselect top "name CA"] get structure
> > C E E C T T T T T E E E E E E T T E E E E E E E T T T T C C E E E C C C
> C C
> > C C C C E E E E E E E E T T E E E E E E E E E E E E E E E E T T E E E E
> E E
> > E E E T T T T T T T E E E C H H H H G G G C C E E E T T T B C T T T T T
> E E
> > E E E E T T E E E E E E E T T T T C C C E E C C C C C C C C E E E E E E
> E E
> > E T T E E E E E E E E E E E E E E E E T T T E E E E E E E E E T T T T T
> T E
> > E E C H H H H H H H H C C E E E C
> >> mol modstyle 0 0 cartoon
> > (works okay)
> >> mol modstyle 0 0 newcartoon
> > (shows almost nothing- although some specks here and there seem visible)
>
> sorry, but i cannot reproduce this.
>
> what version of VMD are you using?
> what is the platform you are running on?
> what is VMD's startup message?
> have you checked if your OpenGL
> support is working properly?
> can you try to see, if it gets better
> after issuing the following command?
>
> display projection orthographic
>
> axel.
>
> >
> > is it cause i am missing CUDA?
> >
> > thanks a lot
> > Maria
> >
>
>
>
> --
> Dr. Axel Kohlmeyer
> akohlmey_at_gmail.com http://goo.gl/1wk0
>
> College of Science and Technology
> Temple University, Philadelphia PA, USA.
>
>