VMD-L Mailing List
From: Chirag Vora (chirag740_at_gmail.com)
Date: Tue Nov 22 2011 - 12:01:52 CST
- Next message: Pablo De Biase: "Re: rlwrap problem on"
- Previous message: Vlad Cojocaru: "Re: movie out of principal component analysis"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Dear all,
I want to plot Radial Distribution function as a function of time (or
frames) from all the trajectories.
I ran simulation on Desmond. Loaded my trajectories on VMD successfully.
Secondly, I am dealing with a synthetic polymer and it's complex with a
small molecule.
I know this ligand binds with a specific residue.
Please suggest other properties I can analyse using VMD that will imply
specificity of liigand for this residue?
Thanks
-- Chirag V. Vora <chiragvora_at_live.com> Department of Pharmacoinformatics<http://niper.gov.in/depart.htm#Pharmacoinformatics> , Block - A, Bioinformatics Infrastructure Facility, National Institute of Pharmaceutical Education and Research<http://niper.gov.in>(NIPER) Sector 67, S.A.S. Nagar, Punjab (INDIA) - 160 062, <http://www.linux4modellers.co.cc/> Phone: +91-9814187740
- Next message: Pablo De Biase: "Re: rlwrap problem on"
- Previous message: Vlad Cojocaru: "Re: movie out of principal component analysis"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]