VMD-L Mailing List

From: Vivek Ranjan (vranjan_at_ncsu.edu)
Date: Tue Aug 02 2011 - 19:51:37 CDT

Hello,

I generated a dcd file using LAMMPS with a periodic boundary condition.
First I load a psf file in vmd and then read in dcd file. In the dynamics,
whenever an atom crosses the box boundary, a long line is created.
Eventually, there are too many such lines and it is difficult to view the
actual molecules inside. Is there a way I can get rid of these lines and
view only atoms ?

Please let me know.

Thank you,

Vivek