VMD-L Mailing List
From: soumyajyoti haldar (shaldar.mail_at_gmail.com)
Date: Tue Mar 01 2011 - 03:50:36 CST
- Next message: Susana Tomasio: "Compiling Fortran bindings for the VMD molfile plugins"
- Previous message: Olaf Lenz: "Re: Drawing Bonds in Periodic structure"
- In reply to: Olaf Lenz: "Re: Drawing Bonds in Periodic structure"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Hi Olaf,
Thanks for your suggestion.
2011/3/1 Olaf Lenz <olenz_at_icp.uni-stuttgart.de>
> Hi!
>
> On 02/28/2011 05:07 PM, soumyajyoti haldar wrote:
> > I want to draw a figure to show a graphene surface with periodic
> > image. From the graphical representation window, I have drawn
> > periodic images in X and Y direction. However, there is no bond
> > connection between the periodic images.
> [clip]
> > Could you please give me some help? I am very grateful if you could
> > tell me some convenient way to add bonds between periodic images.
> > Thank you very much!
>
> There is no simple way to create bonds to periodic images. The only
> thing you can do is to create a single file that contains a number of
> copies of the original atoms, shifted by the unit cell geometry, and add
> the corresponding bond information.
>
> Olaf
>
>
> --
> Dr. rer. nat. Olaf Lenz
> Institut für Computerphysik, Pfaffenwaldring 27, D-70569 Stuttgart
> Phone: +49-711-685-63607
>
-- Soumyajyoti Haldar PhD Student, JRF Advance Computation Laboratory Department of Physics; University of Pune Ganeshkhind; Pune - 411 007; INDIA phone : +91 - (0)20 - 25692678 - 408 fax : +91 - (0)20 - 25691684 mobile : +91 - (0)9921270974 e-mail : shaldar_at_phyics.unipune.ac.in e-mail : shaldar_at_cms.unipune.ac.in web : http://cms.unipune.ac.in/~shaldar/ ~~~***~~~***~~~***~~~***~~~***~~~***~~~
- Next message: Susana Tomasio: "Compiling Fortran bindings for the VMD molfile plugins"
- Previous message: Olaf Lenz: "Re: Drawing Bonds in Periodic structure"
- In reply to: Olaf Lenz: "Re: Drawing Bonds in Periodic structure"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]