VMD-L Mailing List

From: Peter Freddolino (petefred_at_ks.uiuc.edu)
Date: Tue Feb 08 2011 - 23:35:00 CST

Hello Juan,
You can use the -updatesel argument. Running namdenergy with no
arguments should give you a full list of options.
Best,
Peter

On 02/08/2011 09:02 PM, juan roman wrote:
> Hi all,
> I am pretty new to VMD.
> I am trying to use VMD's NAMDEnergy plugin in the text mode to calculate
> the energy of a group of atoms within 5 A of one residue.
> What I really need is NAMDEnergy to update the selection. How can I do this?
> Thanks a lot,
> Juan Ramon