VMD-L Mailing List

From: prabhakar g (prabha.iisc_at_googlemail.com)
Date: Wed Jan 05 2011 - 18:12:19 CST

Dear VMD users,

I am new to VMD and would like to get some help related to orienting a
protein molecule. I have a protein molecule and want to save the coordinates
of the protein molecule in all possible orientations(each orientation
seperately). I came across the Orient package of VMD.(
http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/orient/), in
that there is a script for orienting the molecule along its principal axis.
Could some one help me to modify the script so that I can save all possible
orientation of the molecule. Thanks in advance.

Sincerely
prabh