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From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Tue Jan 04 2011 - 09:28:39 CST

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On Tue, Jan 4, 2011 at 2:58 AM, Jervis Chu <nxchu_at_foxmail.com> wrote:
> Hi,
>
>  I generated an XYZ file, like
>
> 3
> atoms
> 1 0.0  0.0  0.0
> 1 1.6  0.0  0.0
> 1 2.9  0.0  0.0
> 3
> atoms
> 1 0.0  0.0  0.0
> 1 1.7  0.0  0.0
> 1 3.0  0.0  0.0
> ...
> ...
>
> All atoms are carbon.
>
> I want to show dynamic bonds in VMD with cutoff distance 1.6. Can anyone
> tell me how to do this on XYZ files.

sorry for stating the obvious, but have you tried using
the "Dynamic Bonds" representation???

axel.

>
> Thanks in advance.
>
> Regards,
> ________________________________
> Jervis Chu

-- 
Dr. Axel Kohlmeyer
akohlmey_at_gmail.com  http://goo.gl/1wk0
Institute for Computational Molecular Science
Temple University, Philadelphia PA, USA.

• Next message: Stephanie Teich-McGoldrick: "VMD 1.8.7 and lammpsplugin.so error"
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