VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Jun 02 2010 - 12:58:54 CDT

Hi,
  Without having your files to look at, it is hard to guess what happened.
What file format was your original structure written in? This might be
a file format or parsing limitation of some kind. What version of VMD
are you using?

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Wed, Jun 02, 2010 at 03:53:51PM +0530, sriteja mantha wrote:
> hi,
> I am working on a molecular system containing morethan 10000 Residues,
> with morethan 30000 atoms. I am using VMD's psfgen plugin to generate
> .psf file for my system.
> however in the .pdb and .psf files thus generated , contains only 9999
> residues , rest of the residues are totally missing
>
> please do suggest me how to deal with system containing more than 10000 in
> generating .psf file
>
> looking froward for a reply
>
> Thanking you
>
> Sriteja Mantha 

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NIH Resource for Macromolecular Modeling and Bioinformatics
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