VMD-L Mailing List

From: Naiyin Yu (nyyu_at_brandeis.edu)
Date: Thu Jan 21 2010 - 17:09:10 CST

Hello,

I have a question about count the number of atoms, ie waters in a
certain volume, which is constructed by couples of subunits and I
already known the boundary of the edges of each units. I was wondering
whether VMD could count the number of atoms inside the subunits. And is
there any criteria to the min of the subunits (ie larger than the size
of the atoms volume) so I could avoid double count.

Thanks a lot!

Naiyin