VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Jan 14 2010 - 17:11:56 CST
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Irene,
Thanks for pointing this out. I'll get the plugin documentation
links updated tonight. You can find all of the relevant APBS info
at the links below.
Main ABPS page:
http://www.poissonboltzmann.org/apbs/
Tutorials:
http://apbs.wustl.edu/MediaWiki/index.php/APBS_examples
Cheers,
John
On Thu, Jan 14, 2010 at 01:01:14PM -1000, Irene Newhouse wrote:
> The APBS links on the APBS plugin page are broken. I'm
> particularly feeling the lack of the link to the tutorial page. I've found
> various information that's helped me fill in the input data needed by the
> "ELEC values" window. But I still don't know how to do "vacc sphere
> density" -- it doesn't seem to be a term native to the APBS manuals I
> managed to find online. How about "mobile ions"? Is there by any chance a
> worked tutorial example using the VMD plugin somewhere?
>
> Thanks!
> Irene Newhouse
>
> ----------------------------------------------------------------------
>
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-- NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 Email: johns_at_ks.uiuc.edu Phone: 217-244-3349 WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
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