VMD-L Mailing List

From: J. Rui Rodrigues (joaquim.rodrigues_at_estg.ipleiria.pt)
Date: Thu Apr 02 2009 - 07:19:40 CDT

Hi,

I think you can't change the order. If the order is important for, e.g., fitting two structures, you may want to check
this thread:
http://www.ks.uiuc.edu/Research/vmd/mailing_list/vmd-l/10171.html

Hope this helps,
Rui Rodrigues

On Thu, 2 Apr 2009 10:57:37 +0000, Steve Massard wrote
> Hello,
>
> I am trying to developpe a Tcl script. Unfortunatly i have a problem
> with the atomselect command from VMD.
> If i make a selection, the order of the atoms in the selection is not
> the order i have choosen them:
> for example: if i make the selection " set sel [atomselect 0 "index 3 0
> 1 5"] " the atoms are stored in a different order (not 3 0 1 5)
> but "$sel list" "0 1 3 5".
>
> How can i get the atoms in the order i typ them in the atomselect command?
>
> Thank you very much for any help.
>
> Greetings.
>
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