VMD-L Mailing List

From: JT (jtibbitt_at_odu.edu)
Date: Tue Jan 27 2009 - 11:01:41 CST

I know you can save a PDB trajectory from the menu with File --> Save
Coordinates .......
Also, you can generate the TCL equivalent of that operation by using
nice TCL logging feature.
Jeff Tibbitt

On Jan 27, 2009, at 9:42 AM, Axel Kohlmeyer wrote:

> On Tue, 27 Jan 2009, Andres Morales N wrote:
>
> AM>
> AM> Hi!
> AM>
> AM> I know how to get a PDB file from DCD file, but only one each
> time.
> AM> Does anybody know how to get all PBD files (1000 frames) from
> DCD file at once?
> AM> Sorry, if it is a dummy question.
>
> check out the animate write keyword in VMD.
> the rest can be easily done with a little tcl script.
>
> cheers,
> axel.
>
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> --
> ======================================================================
> =
> Axel Kohlmeyer akohlmey_at_cmm.chem.upenn.edu http://
> www.cmm.upenn.edu
> Center for Molecular Modeling -- University of Pennsylvania
> Department of Chemistry, 231 S.34th Street, Philadelphia, PA
> 19104-6323
> tel: 1-215-898-1582, fax: 1-215-573-6233, office-tel: 1-215-898-5425
> ======================================================================
> =
> If you make something idiot-proof, the universe creates a better
> idiot.