VMD-L Mailing List

From: dimka (newyorkdimka_at_gmail.com)
Date: Wed Nov 26 2008 - 17:09:57 CST

After you load the desmond trajectory into VMD, in main menu,
right-click on your molecule and select "Save Coordinates." Then
select the filet ype as DCD.

dima

On Wed, Nov 26, 2008 at 5:24 PM, Dong Xu <d1xu_at_ucsd.edu> wrote:
> Hi All,
>
> Does anyone know how to convert Desmond trajectory file to dcd format? They
> provide a VMD plug-in for loading the trajectory into VMD. Is there a way to
> export it to dcd within VMD? Or maybe there's another workaround using
> catdcd?
>
> Thanks,
>
> -DX
>