VMD-L Mailing List

From: Dong Xu (d1xu_at_ucsd.edu)
Date: Wed Nov 26 2008 - 17:15:25 CST

Thanks. What about large trajectory that can't fit in the memory?

-DX

On Wed, Nov 26, 2008 at 3:09 PM, dimka <newyorkdimka_at_gmail.com> wrote:

> After you load the desmond trajectory into VMD, in main menu,
> right-click on your molecule and select "Save Coordinates." Then
> select the filet ype as DCD.
>
> dima
>
> On Wed, Nov 26, 2008 at 5:24 PM, Dong Xu <d1xu_at_ucsd.edu> wrote:
> > Hi All,
> >
> > Does anyone know how to convert Desmond trajectory file to dcd format?
> They
> > provide a VMD plug-in for loading the trajectory into VMD. Is there a way
> to
> > export it to dcd within VMD? Or maybe there's another workaround using
> > catdcd?
> >
> > Thanks,
> >
> > -DX
> >
>