VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Aug 29 2008 - 01:45:45 CDT

Hi,
  I'm back in town and slowly catching up on emails...
The bug you describe with the CRD output lacking a newline
has been corrected in the current CVS source tree. You should
be able to build the latest version from CVS:
  http://www.ks.uiuc.edu/Research/vmd/doxygen/cvsget.html
  http://www.ks.uiuc.edu/Research/vmd/plugins/doxygen/compiling.html#compiling

I believe Peter addressed the other problem you were having, which
was caused by the lack of a command line parameter.

Cheers,
  John Stone
  vmd_at_ks.uiuc.edu

On Wed, Aug 27, 2008 at 03:01:38PM +0200, Robert Fenwick wrote:
> Hi,
>
> I have been having a few problems with catDCD and would like to know
> if this is being developed and who might be able to send me the source
> or if someone could fix some bugs
>
> The primary problem that I am having is converting from pdb to crd
> format and what is happening is that the last line that contains ten
> values is never terminates with an end line, so that the last line can
> be up to 19 fields ling. This might not be a problem for some
> programs, however it is causing problems for me.
>
> The secondary issue is that catDCD does not recognise its self
> generated header for crd files.
>
> Cheers,
>
>
> Bryn 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078