VMD-L Mailing List

From: Andrew Huang (huang_at_gatech.edu)
Date: Mon May 12 2008 - 16:36:18 CDT

Is there a tool or script within VMD that will output all the bonds
specified in a PSF and their lengths? I'm getting a "Bad global
exclusion count" error in NAMD, and I'm trying to figure out if the
PSF connects atoms that are far apart.

Andrew Huang
Harvey Lab
School of Biology
Georgia Institute of Technology
310 Ferst Drive, Atlanta, GA 30332
Office: 329 Cherry Emerson
Email: huang_at_gatech.edu