From: snoze pa (
Date: Wed Jan 09 2008 - 10:23:31 CST

Thanks for ur mail but I am trying to generate a picture(graphics in png/tif
format) from VMD where two atoms are linked . How can I show in graphics
that the two atoms are linked.


On Jan 9, 2008 7:39 AM, Nazanin Samadi <> wrote:

> Hi, what do you mean by link? if you mean you want to have a bond between
> atoms you should use the psf file format for atoms coordinates. you can not
> do that by xyz file. actually there is another way too, but I do not
> recommend.
> I hope this was your question.
> nazanin