VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu Nov 07 2002 - 10:33:26 CST

Dear Ross,
  Yes, you can load a sequence of PDB files into VMD as a trajectory
very easily, using a simple Tcl script which I have previously written
for this purpose:
  http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/animatepdbs/

Thanks,
  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Nov 07, 2002 at 11:10:09AM -0500, Ross J. Toedte wrote:
> I have a time series of PDBs that I would like to animate and interact
> with in our CAVE. Toward the first part of this, is there any way VMD
> can load a series of individual PDBs into an animatable form?
> Alternatively, is there a translator from individual PDBs into a
> trajectory file that VMD can read?
>
> Thanks,
>
> ___________________________________
> Ross J. Toedte
> Computer Science and Mathematics Division
> Oak Ridge National Laboratory
> Oak Ridge, TN 37831-6367
> (865)574-1912
> rjt_at_ornl.gov 

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