From: Peter Freddolino (
Date: Fri Sep 21 2007 - 06:57:23 CDT

Hi Andrea,
it would be helpful to know what went wrong when you tried using autopsf.
Peter wrote:
> Dear all,
> I am trying to generate a PSF file from a PDB which contains water
> molecules. I used AutoPSF VMD plugin but it did not work. I tried
> using "pdbalias residue HOH TIP3" in a file but it did not work as well.
> Do you have any suggestions?
> Andrea Cristiani
> LCT-Biochimie Pharmaceutique
> Universit de Genve