VMD-L Mailing List

From: maria goranovic (mariagoranovic_at_gmail.com)
Date: Tue Sep 18 2007 - 08:21:45 CDT

Hi,

I want to change the representation of water molecules from lines to VDW
when they cross a certain z-coordinate while i am making a movie using VMD.
Is this possible ?

Also, how can I dynamically change the selection of water molecules during
an animation (without having to separate pdb files for each frame) ? The
script bridging_waters.tcl in the script archive could probably do it, but
its implementation is not clear. Can someone please help ?

Thank you for helping out
-Maria 

-- 
Maria G.
Technical University of Denmark
Copenhagen