VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri May 24 2002 - 12:05:19 CDT

Mark,
  I don't have a replacement for the TclX "replicate" yet, but
here's a document describing what it does. (New versions of VMD
do not use TclX, which is the reason these things used to work, but
don't work anymore....)
    http://www.aaa-plus.com/joy/docs/Manual.Tcl/English.lproj/TclX/replicate.txt.html

  John Stone
  vmd_at_ks.uiuc.edu

On Fri, May 24, 2002 at 12:02:42PM -0500, John Stone wrote:
>
> Mark,
> This is a script that we missed updating to work with the
> newer versions of VMD. The cure for scripts using "luniq" is
> typically to replace "luniq" with either "lsort -integer -unique" or
> with "lsort -unique", which typically gives comparable results
> (as long as sorting the data is ok and doesn't have side effects...)
> Try using "lsort -unique" in that metal_environment script in place
> of "luniq" and let us know if that cures your problem. If that works,
> well, then I'll update the code in the script library as well.
>
> Thanks,
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Fri, May 24, 2002 at 12:38:00PM -0400, Storr, Mark wrote:
> > Hi,
> >
> > I am trying to run the metal_environment script, however upon trying to do
> > so VMD gives the 'luniq invalid command name'. In addition from looking
> > through the script I do not recognise the replicate command in the script.
> > I was therefore wondering if anyone has used this script and if so how these
> > problems were overcome.
> >
> > Thanks
> >
> > Mark
> >
>
> --
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349              
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078