VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Mon Apr 22 2002 - 14:48:19 CDT

Dear Joe,
  I suspect that you could get Matlab, Mathematica, or similar
tools to plot this type of data. Gnuplot might even do it nicely.
Plot it as a "height field", a 3-D surface plot of sorts...
I haven't done it, but I can't imagine that it would be too hard to
accomplish in one of those three programs I mentioned, as I believe all
three have mechanisms for this.

  John Stone
  vmd_at_ks.uiuc.edu

On Thu, Apr 18, 2002 at 02:22:40PM -0500, Joe Huang wrote:
> Dear VMD users,
> Has anybody tried and succeeded in plotting the data file created by one
> of the VMD analysis scripts listed in the following link?
> http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/difference_matrix/
> I have tried "xmgr" and "microsoft Excel", but neither works.
> This should be a kind of 3D or matrix plotting because there are two
> indices for each entry in the data file.
> Your help will be much appreciated!
>
> Joe
>
> --
> *******************************************
> Hung-Chung(Joe)Huang, M. T., M. Sc., Ph. D.
> Department of Biology and Biochemistry
> University of Houston, Houston, TX 77204
> Tel: (713) 743-8355, Fax: (713) 743-8351
> e-mail: HCHuang_at_uh.edu
> http://adrik.bchs.uh.edu/~jhuang
> *******************************************
> 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349              
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