Tutorial-l Mailing List

From: wahn_at_uiuc.edu
Date: Wed Mar 14 2007 - 14:46:20 CDT

Dear NAMD users,

How do you solvate your protein or whatever the molecule?

I have used the solvation function of VMD.
But, my system after solvation does not have enough water molecules and contains a kind of hollow space in it.

How may I adjust and measure the water density of my system?

Your comment could save me a lot of time and efforts.
Thank you.

Won-Young
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