Main Page Namespace List Class Hierarchy Alphabetical List Compound List File List Namespace Members Compound Members File Members Related Pages
VMD Plugins (current) File Members
_ | a | b | c | d | e | f | g | h | i | j | k | l | m | n | o | p | q | r | s | t | u | v | w | x
Here is a list of all file members with links to the files they belong to:- _ -
- a -
- b -
- c -
- calcNormals()
: offplugin.C
- cat
: vmdplugin.h
- CCP4HDSIZE
: ccp4plugin.C
- CDF_ERR
: netcdfplugin.c
- CDF_SUCCESS
: netcdfplugin.c
- CDF_TYPE_AMBER
: netcdfplugin.c
- CDF_TYPE_MMTK
: netcdfplugin.c
- CDF_TYPE_UNKNOWN
: netcdfplugin.c
- cfiletype
: main.c
- CHAIN_SIZE
: pdbxplugin.C
- charToNum
: pdbxplugin.C
- check_add_wavefunctions()
: orcaplugin.C, gamessplugin.c
- CHECK_FEOF
: dcdplugin.c
- CHECK_FREAD
: dcdplugin.c
- CI_ALDET
: qmplugin.h
- CI_CIS
: qmplugin.h
- CI_FSOCI
: qmplugin.h
- CI_GENCI
: qmplugin.h
- CI_GUGA
: qmplugin.h
- CI_NONE
: qmplugin.h
- CI_ORMAS
: qmplugin.h
- CI_UNKNOWN
: qmplugin.h
- ClinComb2()
: graspplugin.C
- close()
: pdbxplugin.C
- close_avsfield_read()
: avsplugin.C
- close_basis_read()
: basissetplugin.c
- close_bgf_read()
: bgfplugin.C
- close_bgf_write()
: bgfplugin.C
- close_biomocca_read()
: biomoccaplugin.C
- close_brix_read()
: brixplugin.C
- close_car_read()
: carplugin.c
- close_ccp4_read()
: ccp4plugin.C
- close_cdf_read()
: netcdfplugin.c
- close_cor_read()
: corplugin.c
- close_cpmd_read()
: cpmdplugin.c
- close_cpmdlog_read()
: cpmdlogplugin.c
- close_crd_read()
: crdplugin.c
- close_crd_write()
: crdplugin.c
- close_cube_read()
: cubeplugin.C
- close_dcd_read()
: dcdplugin.c
- close_dlpoly_read()
: dlpolyplugin.c
- close_dsn6_read()
: dsn6plugin.C
- close_dx_read()
: dxplugin.C
- close_dx_write()
: dxplugin.C
- close_edm_read()
: edmplugin.C
- close_edm_write()
: edmplugin.C
- close_file_read()
: stlplugin.C, raster3dplugin.C, plyplugin.C, offplugin.C, namdbinplugin.c, msmsplugin.C, molemeshplugin.C, graspplugin.C, dcdplugin.c, binposplugin.c, amiraplugin.C, abinitplugin.c
- close_file_write()
: pdbxplugin.C, pdbplugin.c, namdbinplugin.c, dcdplugin.c, binposplugin.c, abinitplugin.c
- close_fs4_read()
: fs4plugin.C
- close_g96_read()
: gromacsplugin.C
- close_gamess_read()
: gamessplugin.c
- close_gaussian_read()
: gaussianplugin.c
- close_grd_read()
: grdplugin.C
- close_grid_read()
: gridplugin.C
- close_gro_read()
: gromacsplugin.C
- close_gro_write()
: gromacsplugin.C
- close_hoomd_read()
: hoomdplugin.c
- close_hoomd_write()
: hoomdplugin.c
- close_js_read()
: jsplugin.c
- close_js_write()
: jsplugin.c
- close_lammps_read()
: lammpsplugin.c
- close_lammps_write()
: lammpsplugin.c
- close_lammpsyaml_read()
: lammpsyamlplugin.c
- close_lammpsyaml_write()
: lammpsyamlplugin.c
- close_map_read()
: mapplugin.C
- close_mdf_read()
: mdfplugin.C
- close_mmcif_read()
: mmcif.C
- close_mol2_read()
: mol2plugin.C
- close_mol2_write()
: mol2plugin.C
- close_molden_read()
: moldenplugin.c
- close_orca_read()
: orcaplugin.C
- close_parm7_file()
: ReadPARM7.h
- close_parm7_read()
: parm7plugin.C
- close_parm_read()
: parmplugin.C
- close_pbeq_read()
: pbeqplugin.C
- close_pdb_read()
: webpdbplugin.c, pdbplugin.c, babelplugin.c
- close_pdbx_read()
: pdbxplugin.C
- close_phi_read()
: phiplugin.C
- close_plt_read()
: pltplugin.C
- close_ply()
: ply.h, ply.c
- close_pqr_read()
: pqrplugin.c
- close_pqr_write()
: pqrplugin.c
- close_psf_read()
: psfplugin.c
- close_psf_write()
: psfplugin.c
- close_qcschema_read()
: qcschemaplugin.c
- close_read()
: lmplugin.C
- close_rst_read()
: rst7plugin.c
- close_rst_write()
: rst7plugin.c
- close_situs_read()
: situsplugin.C
- close_situs_write()
: situsplugin.C
- close_spider_read()
: spiderplugin.C
- close_tinker_read()
: tinkerplugin.c
- close_tng()
: tngplugin.C
- close_tpr_read()
: tprplugin.C
- close_trr_read()
: gromacsplugin.C
- close_trr_write()
: gromacsplugin.C
- close_uhbd_read()
: uhbdplugin.C
- close_vasp5xdatcar_read()
: vasp5xdatcarplugin.c
- close_vaspchgcar_read()
: vaspchgcarplugin.c
- close_vaspoutcar_read()
: vaspoutcarplugin.c
- close_vaspparchg_read()
: vaspparchgplugin.c
- close_vaspposcar_read()
: vaspposcarplugin.c
- close_vaspposcar_write()
: vaspposcarplugin.c
- close_vaspxdatcar_read()
: vaspxdatcarplugin.c
- close_vaspxml_read()
: vaspxmlplugin.c
- close_vtk_read()
: vtkplugin.C
- close_xbgf_read()
: xbgfplugin.C
- close_xbgf_write()
: xbgfplugin.C
- close_xsf_read()
: xsfplugin.C
- close_xyz_read()
: xyzplugin.c
- close_xyz_write()
: xyzplugin.c
- CoeffRowBlock
: orcaplugin.C
- COLOUR
: graspplugin.C
- COLUMN_BFACTOR
: pdbxplugin.C
- COLUMN_BUFFER_SIZE
: pdbxplugin.C
- COLUMN_CHAIN
: pdbxplugin.C
- COLUMN_CHAIN_AUTH
: pdbxplugin.C
- COLUMN_CHARGE
: pdbxplugin.C
- COLUMN_INSERTION
: pdbxplugin.C
- COLUMN_JUNK
: pdbxplugin.C
- COLUMN_MODEL_NUM
: pdbxplugin.C
- COLUMN_NAME
: pdbxplugin.C
- COLUMN_NUMBER
: pdbxplugin.C
- COLUMN_OCCUPANCY
: pdbxplugin.C
- COLUMN_RESID
: pdbxplugin.C
- COLUMN_RESID_AUTH
: pdbxplugin.C
- COLUMN_RESNAME
: pdbxplugin.C
- COLUMN_TYPE
: pdbxplugin.C
- COLUMN_TYPE_AUTH
: pdbxplugin.C
- COLUMN_X
: pdbxplugin.C
- COLUMN_Y
: pdbxplugin.C
- COLUMN_Z
: pdbxplugin.C
- convD
: orcaplugin.C
- convert_tng_box_shape_to_vmd()
: tngplugin.C
- convert_to_float()
: tngplugin.C
- convert_vmd_box_for_writing()
: gromacsplugin.C
- convert_vmd_box_shape_to_tng()
: tngplugin.C
- convertPure()
: orcaplugin.C
- convF
: orcaplugin.C
- copy_comments_ply()
: ply.h, ply.c
- copy_obj_info_ply()
: ply.h, ply.c
- copy_property()
: ply.c
- COR_RECORD_LENGTH
: corplugin.c
- corgets()
: corplugin.c
- cosangle2deg()
: lammpsyamlplugin.c, lammpsplugin.c
- count_mdf_bonds()
: mdfplugin.C
- count_orbitals()
: qcschemaplugin.c, moldenplugin.c
- cplugin
: main.c
- CPMDLOG_BASIS_DEBUG
: cpmdlogplugin.c
- CPMDLOG_DEBUG
: cpmdlogplugin.c
- crdboxplugin
: crdplugin.c
- create_pdbxParser()
: pdbxplugin.C
- create_pdbxWriter()
: pdbxplugin.C
- cube_buildrotmat()
: cubeplugin.C
- cube_readbox()
: cubeplugin.C
- CURVATURES
: graspplugin.C
- d -
- e -
- f -
- F_ANGLES
: tprplugin.h
- F_ANGRES
: tprplugin.h
- F_ANGRESZ
: tprplugin.h
- F_ANHARM_POL
: tprplugin.h
- F_BHAM
: tprplugin.h
- F_BHAM_LR
: tprplugin.h
- F_BONDS
: tprplugin.h
- F_CBTDIHS
: tprplugin.h
- F_CMAP
: tprplugin.h
- F_COM_PULL
: tprplugin.h
- F_CONNBONDS
: tprplugin.h
- F_CONSTR
: tprplugin.h
- F_CONSTRNC
: tprplugin.h
- F_COUL14
: tprplugin.h
- F_COUL_LR
: tprplugin.h
- F_COUL_RECIP
: tprplugin.h
- F_COUL_SR
: tprplugin.h
- F_CROSS_BOND_ANGLES
: tprplugin.h
- F_CROSS_BOND_BONDS
: tprplugin.h
- F_CUBICBONDS
: tprplugin.h
- F_DENSITYFITTING
: tprplugin.h
- F_DIHRES
: tprplugin.h
- F_DIHRESVIOL
: tprplugin.h
- F_DISPCORR
: tprplugin.h
- F_DISRES
: tprplugin.h
- F_DISRESVIOL
: tprplugin.h
- F_DKDL
: tprplugin.h
- F_DPD
: tprplugin.h
- F_DVDL
: tprplugin.h
- F_DVDL_BONDED
: tprplugin.h
- F_DVDL_CONSTR
: tprplugin.h
- F_DVDL_COUL
: tprplugin.h
- F_DVDL_RESTRAINT
: tprplugin.h
- F_DVDL_TEMPERATURE
: tprplugin.h
- F_DVDL_VDW
: tprplugin.h
- F_ECONSERVED
: tprplugin.h
- F_EKIN
: tprplugin.h
- F_EPOT
: tprplugin.h
- F_EQM
: tprplugin.h
- F_ETOT
: tprplugin.h
- F_FBPOSRES
: tprplugin.h
- F_FENEBONDS
: tprplugin.h
- F_FOURDIHS
: tprplugin.h
- F_G96ANGLES
: tprplugin.h
- F_G96BONDS
: tprplugin.h
- F_GB12
: tprplugin.h
- F_GB13
: tprplugin.h
- F_GB14
: tprplugin.h
- F_GBPOL
: tprplugin.h
- F_HARMONIC
: tprplugin.h
- F_IDIHS
: tprplugin.h
- F_LINEAR_ANGLES
: tprplugin.h
- F_LJ
: tprplugin.h
- F_LJ14
: tprplugin.h
- F_LJ_LR
: tprplugin.h
- F_LJ_RECIP
: tprplugin.h
- F_LJC14_Q
: tprplugin.h
- F_LJC_PAIRS_NB
: tprplugin.h
- F_MORSE
: tprplugin.h
- F_NPSOLVATION
: tprplugin.h
- F_NRE
: tprplugin.h
- F_ORIRES
: tprplugin.h
- F_ORIRESDEV
: tprplugin.h
- F_PDIHS
: tprplugin.h
- F_PDISPCORR
: tprplugin.h
- F_PIDIHS
: tprplugin.h
- F_POLARIZATION
: tprplugin.h
- F_POSRES
: tprplugin.h
- F_PRES
: tprplugin.h
- F_QUARTIC_ANGLES
: tprplugin.h
- F_RBDIHS
: tprplugin.h
- F_RESTRANGLES
: tprplugin.h
- F_RESTRBONDS
: tprplugin.h
- F_RESTRDIHS
: tprplugin.h
- F_RF_EXCL
: tprplugin.h
- F_SETTLE
: tprplugin.h
- F_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- F_TABANGLES
: tprplugin.h
- F_TABBONDS
: tprplugin.h
- F_TABBONDSNC
: tprplugin.h
- F_TABDIHS
: tprplugin.h
- F_TEMP
: tprplugin.h
- F_THOLE_POL
: tprplugin.h
- F_UREY_BRADLEY
: tprplugin.h
- F_VSITE1
: tprplugin.h
- F_VSITE2
: tprplugin.h
- F_VSITE2FD
: tprplugin.h
- F_VSITE3
: tprplugin.h
- F_VSITE3FAD
: tprplugin.h
- F_VSITE3FD
: tprplugin.h
- F_VSITE3OUT
: tprplugin.h
- F_VSITE4FD
: tprplugin.h
- F_VSITE4FDN
: tprplugin.h
- F_VSITEN
: tprplugin.h
- F_VTEMP
: tprplugin.h
- F_WATER_POL
: tprplugin.h
- Face
: plyplugin.C
- face_props
: plyplugin.C
- FALSE
: tprplugin.C, qmplugin.h, gaussianplugin.h
- fAngMom
: orcaplugin.C
- file()
: babelplugin.c
- FileDesc
: lammpsyamlplugin.c, lammpsplugin.c
- fill_basis_arrays()
: qcschemaplugin.c, orcaplugin.C, moldenplugin.c, gaussianplugin.c, gamessplugin.c, cpmdlogplugin.c, basissetplugin.c
- find_closing_bracket()
: netcdfplugin.c
- find_data_offset()
: amiraplugin.C
- find_element()
: ply.c
- find_item_keyword()
: lammpsyamlplugin.c, lammpsplugin.c
- find_next_item()
: lammpsyamlplugin.c, lammpsplugin.c
- find_property()
: ply.c
- find_traj_end()
: gaussianplugin.c, cpmdlogplugin.c
- fio_caddr_t
: fastio.h
- FIO_DIRECT
: fastio.h
- fio_fclose()
: fastio.h
- fio_fd
: fastio.h
- fio_fread()
: fastio.h
- fio_fseek()
: fastio.h
- fio_ftell()
: fastio.h
- fio_fwrite()
: fastio.h
- fio_open()
: fastio.h
- FIO_READ
: fastio.h
- fio_read_int32()
: fastio.h
- fio_readv()
: fastio.h
- FIO_SEEK_CUR
: fastio.h
- FIO_SEEK_END
: fastio.h
- FIO_SEEK_SET
: fastio.h
- fio_size_t
: fastio.h
- FIO_WRITE
: fastio.h
- fio_write_int32()
: fastio.h
- fio_write_str()
: fastio.h
- FIREFLY8POST6695
: gamessplugin.c
- FIREFLY8PRE6695
: gamessplugin.c
- FIRSTIDX
: Gromacs.h
- fix_fortran_exp()
: gaussianplugin.c, cpmdlogplugin.c
- FLAG_BFACTOR
: pdbxplugin.C
- flag_block_comment
: qcschema_json.c
- FLAG_CHAIN_LENGTH
: pdbxplugin.C
- FLAG_CHARGE
: pdbxplugin.C
- flag_done
: qcschema_json.c
- flag_escaped
: qcschema_json.c
- FLAG_INSERTION
: pdbxplugin.C
- flag_line_comment
: qcschema_json.c
- FLAG_MODEL_NUM
: pdbxplugin.C
- flag_need_colon
: qcschema_json.c
- flag_need_comma
: qcschema_json.c
- flag_next
: qcschema_json.c
- flag_num_e
: qcschema_json.c
- flag_num_e_got_sign
: qcschema_json.c
- flag_num_e_negative
: qcschema_json.c
- flag_num_got_decimal
: qcschema_json.c
- flag_num_negative
: qcschema_json.c
- flag_num_zero
: qcschema_json.c
- FLAG_OCCUPANCY
: pdbxplugin.C
- flag_reproc
: qcschema_json.c
- flag_seek_value
: qcschema_json.c
- flag_string
: qcschema_json.c
- Float32
: ply.h
- Float64
: ply.h
- fort_eat_recmark()
: fortread.h
- fort_get_endian_reclen()
: fortread.h
- FORT_RECLEN_32BIT
: fortread.h
- FORT_RECLEN_64BIT
: fortread.h
- fortread_4()
: fortread.h
- FOUND
: orcaplugin.C, gamessplugin.c, basissetplugin.c
- fpexpftoc()
: qmplugin.h
- free_other_elements_ply()
: ply.h, ply.c
- free_ply()
: ply.h, ply.c
- fshell
: orcaplugin.C
- ftupd
: tprplugin.h
- g -
- g96_countatoms()
: Gromacs.h
- g96_header()
: Gromacs.h
- g96_plugin
: gromacsplugin.C
- g96_rec()
: Gromacs.h
- g96_timestep()
: Gromacs.h
- G_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- GAMESSPOST20050627
: gamessplugin.c
- GAMESSPRE20050627
: gamessplugin.c
- GAMESSUNKNOWN
: gamessplugin.c
- GAUSSIAN_BASIS_DEBUG
: gaussianplugin.c
- GAUSSIAN_DEBUG
: gaussianplugin.c
- GEO_open_file_read()
: abinitplugin.c
- GEO_read_next_timestep()
: abinitplugin.c
- GEO_read_structure()
: abinitplugin.c
- get_ascii_item()
: ply.c
- get_atom_radius()
: pqrplugin.c
- get_basis()
: qcschemaplugin.c, orcaplugin.C, moldenplugin.c, gaussianplugin.c, gamessplugin.c, basissetplugin.c
- get_basis_options()
: gaussianplugin.c, gamessplugin.c
- get_basis_stats()
: gamessplugin.c
- get_bgf_coordinates()
: bgfplugin.C
- get_bgf_fields()
: bgfplugin.C
- get_binary_item()
: ply.c
- get_cart_hessian()
: gamessplugin.c
- get_comments_ply()
: ply.h, ply.c
- get_contrl()
: gaussianplugin.c, gamessplugin.c
- get_contrl_firefly()
: gamessplugin.c
- get_coordinates()
: orcaplugin.C, gaussianplugin.c, gamessplugin.c
- get_cor_atom()
: corplugin.c
- get_element_description_ply()
: ply.h, ply.c
- get_element_list_ply()
: ply.h, ply.c
- get_element_ply()
: ply.h, ply.c
- get_element_setup_ply()
: ply.h, ply.c
- get_esp_charges()
: gamessplugin.c
- get_final_gradient()
: gamessplugin.c
- get_final_info()
: gaussianplugin.c, cpmdlogplugin.c
- get_final_properties()
: gamessplugin.c
- get_fmoxyz()
: gamessplugin.c
- get_gradient()
: gamessplugin.c
- get_guess_options()
: gamessplugin.c
- get_info_ply()
: ply.h, ply.c
- get_input_structure()
: orcaplugin.C, gaussianplugin.c, gamessplugin.c
- get_int_coordinates()
: gaussianplugin.c
- get_int_coords()
: gamessplugin.c
- get_int_hessian()
: gamessplugin.c
- get_internal_basis()
: gaussianplugin.c, cpmdlogplugin.c
- get_item_value()
: ply.c
- get_job_info()
: orcaplugin.C
- GET_LINE
: qcschemaplugin.c, orcaplugin.C, moldenplugin.c, gaussianplugin.c, gamessplugin.c, cpmdlogplugin.c, basissetplugin.c
- get_line()
: raster3dplugin.C
- get_mcscf()
: gamessplugin.c
- get_mdf_bonds()
: mdfplugin.C
- get_new_props_ply()
: ply.h, ply.c
- get_next_noncomment_line()
: amiraplugin.C
- get_normal_modes()
: gamessplugin.c
- get_obj_info_ply()
: ply.h, ply.c
- get_other_element_ply()
: ply.h, ply.c
- get_other_properties()
: ply.c
- get_other_properties_ply()
: ply.h, ply.c
- get_pdb_conect()
: readpdb.h
- get_pdb_coordinates()
: readpdb.h
- get_pdb_cryst1()
: readpdb.h
- get_pdb_fields()
: readpdb.h
- get_pdb_header()
: readpdb.h
- get_population()
: orcaplugin.C, gaussianplugin.c, gamessplugin.c, cpmdlogplugin.c
- get_pqr_coordinates()
: pqrplugin.c
- get_pqr_cryst1()
: pqrplugin.c
- get_pqr_fields()
: pqrplugin.c
- get_proc_mem()
: gaussianplugin.c, gamessplugin.c
- get_prop_type()
: ply.c
- get_properties_input()
: gamessplugin.c
- Get_Property_Values()
: graspplugin.C
- get_psf_atom()
: psfplugin.c
- get_pte_idx()
: periodic_table.h
- get_pte_idx_from_string()
: periodic_table.h
- get_pte_label()
: periodic_table.h
- get_pte_mass()
: periodic_table.h
- get_pte_vdw_radius()
: periodic_table.h
- get_runtitle()
: gaussianplugin.c, gamessplugin.c
- get_scfdata()
: orcaplugin.C, gamessplugin.c
- get_stored_item()
: ply.c
- get_string()
: avsplugin.C
- get_symmetry()
: gamessplugin.c
- get_traj_frame()
: orcaplugin.C, gaussianplugin.c, gamessplugin.c, cpmdlogplugin.c
- get_wavefunction()
: orcaplugin.C, gaussianplugin.c, gamessplugin.c, cpmdlogplugin.c
- get_words()
: ply.c
- get_xbgf_coordinates()
: xbgfplugin.C
- get_xbgf_fields()
: xbgfplugin.C
- getatomfield()
: bgfplugin.C
- getNextWord()
: pdbxplugin.C
- getUniqueResID()
: pdbxplugin.C
- GLOBALCOLOR
: graspplugin.C
- goto_keyline()
: qmplugin.h
- gro_header()
: Gromacs.h
- gro_plugin
: gromacsplugin.C
- gro_rec()
: Gromacs.h
- gro_timestep()
: Gromacs.h
- GROMACS_PLUGIN_MAJOR_VERSION
: gromacsplugin.C
- GROMACS_PLUGIN_MINOR_VERSION
: gromacsplugin.C
- h -
- H5_CALL
: lmplugin.C
- H5_CALL_ASSIGN
: lmplugin.C
- H_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- HARTREE_TO_EV
: unit_conversion.h
- HARTREE_TO_KCAL
: unit_conversion.h
- hash()
: hash.c
- hash_delete()
: hash.h, hash.c
- hash_destroy()
: hash.h, hash.c
- hash_entries()
: hash.h, hash.c
- HASH_FAIL
: inthash.h, hash.h
- hash_init()
: hash.h, hash.c
- hash_insert()
: hash.h, hash.c
- HASH_LIMIT
: inthash.c, hash.c
- hash_lookup()
: hash.h, hash.c
- hash_node_t
: hash.c
- hash_stats()
: hash.h, hash.c
- hash_t
: hash.h
- have_cpmd()
: cpmdlogplugin.c
- have_gamess()
: gamessplugin.c
- have_gaussian()
: gaussianplugin.c
- have_keyline()
: qmplugin.h
- have_orca()
: orcaplugin.C
- header_complete_ply()
: ply.h, ply.c
- hex_value()
: qcschema_json.c
- HOOMD_ACCEL
: hoomdplugin.c
- HOOMD_ANGLE
: hoomdplugin.c
- HOOMD_BODY
: hoomdplugin.c
- HOOMD_BOND
: hoomdplugin.c
- HOOMD_BOX
: hoomdplugin.c
- HOOMD_CHARGE
: hoomdplugin.c
- HOOMD_CONFIG
: hoomdplugin.c
- HOOMD_CONV_POS
: hoomdplugin.c
- HOOMD_COORD
: hoomdplugin.c
- HOOMD_DEBUG
: hoomdplugin.c
- HOOMD_DIAMETER
: hoomdplugin.c
- HOOMD_DIHEDRAL
: hoomdplugin.c
- HOOMD_FORMAT_MAJV
: hoomdplugin.c
- HOOMD_FORMAT_MINV
: hoomdplugin.c
- HOOMD_IMAGE
: hoomdplugin.c
- HOOMD_IMPROPER
: hoomdplugin.c
- HOOMD_MASS
: hoomdplugin.c
- HOOMD_MAXDEPTH
: hoomdplugin.c
- HOOMD_NONE
: hoomdplugin.c
- HOOMD_NUMTAGS
: hoomdplugin.c
- HOOMD_ORIENT
: hoomdplugin.c
- hoomd_parse_line()
: hoomdplugin.c
- HOOMD_POS
: hoomdplugin.c
- hoomd_tag_name
: hoomdplugin.c
- HOOMD_TYPE
: hoomdplugin.c
- HOOMD_UNKNOWN
: hoomdplugin.c
- HOOMD_VEL
: hoomdplugin.c
- HOOMD_WALL
: hoomdplugin.c
- HOOMD_XML
: hoomdplugin.c
- host_is_little_endian()
: Gromacs.h
- i -
- I_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c
- id_merge()
: lammpsyamlplugin.c, lammpsplugin.c
- id_sort()
: lammpsyamlplugin.c, lammpsplugin.c
- identity()
: qmplugin.h
- IMOD_FILE_ID
: ccp4plugin.C
- IMOD_FLAG_HEADER_SPACING
: ccp4plugin.C
- IMOD_FLAG_ORIGIN_INVERTED_SIGN
: ccp4plugin.C
- IMOD_FLAG_SIGNED
: ccp4plugin.C
- IMOD_MAGIC_STAMP
: ccp4plugin.C
- IMPORT_GRAPHICS_LINE_DASHED
: import_graphics_plugin.h
- IMPORT_GRAPHICS_LINE_SOLID
: import_graphics_plugin.h
- import_graphics_linestyle_t
: import_graphics_plugin.h
- IMPORT_GRAPHICS_PLUGIN_TYPE
: import_graphics_plugin.h
- increment_filename()
: abinitplugin.c
- INFOMSGS
: jsplugin.c
- init_qmdata()
: qmplugin.h
- init_rule_ply()
: ply.h, ply.c
- initCharToNum()
: pdbxplugin.C
- Int16
: ply.h
- Int32
: ply.h
- Int8
: ply.h
- inthash()
: inthash.c
- inthash_delete()
: inthash.h, inthash.c
- inthash_destroy()
: inthash.h, inthash.c
- inthash_entries()
: inthash.h, inthash.c
- inthash_init()
: inthash.h, inthash.c
- inthash_insert()
: inthash.h, inthash.c
- inthash_lookup()
: inthash.h, inthash.c
- inthash_node_t
: inthash.c
- inthash_stats()
: inthash.h, inthash.c
- inthash_t
: inthash.h
- IRREGULAR
: avsplugin.C
- is_little_endian()
: graspplugin.C
- isAtomSite()
: pdbxplugin.C
- isPDB_DevFile()
: pdbxplugin.C
- isStructureDataHeader()
: pdbxplugin.C
- isValidateRMSDBond()
: pdbxplugin.C
- iswhiteline()
: qmplugin.h
- j -
- k -
- l -
- l_attr_t
: lammpsyamlplugin.c, lammpsplugin.c
- lammps_attribute
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_DIPOLE
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_FORCES
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_IMAGES
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_NONE
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_SCALED
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_TRICLINIC
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_UNKNOWN
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_UNWRAPPED
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_VELOCITIES
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_COORD_WRAPPED
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_DEBUG
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_ATOMID
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_CHARGE
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_DIAMETER
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_ELEMENT
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_FORX
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_FORY
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_FORZ
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_IMGX
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_IMGY
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_IMGZ
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_MASS
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_MOLID
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_MUX
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_MUY
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_MUZ
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSX
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSXS
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSXSU
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSXU
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSY
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSYS
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSYSU
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSYU
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSZ
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSZS
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSZSU
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_POSZU
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_QUATI
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_QUATJ
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_QUATK
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_QUATW
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_RADIUS
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_TYPE
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_UNKNOWN
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER0
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER1
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER2
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER3
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER4
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER5
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER6
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER7
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_USER8
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_VELX
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_VELY
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FIELD_VELZ
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_FILED_USER9
: lammpsyamlplugin.c, lammpsplugin.c
- LAMMPS_MAX_NUM_FIELDS
: lammpsyamlplugin.c, lammpsplugin.c
- LASTIDX
: Gromacs.h
- line3()
: graspplugin.C
- line_and_col
: qcschema_json.c
- LINE_LEN
: lammpsyamlplugin.c, lammpsplugin.c
- LINESIZE
: xbgfplugin.C, vtkplugin.C, vaspplugin.h, uhbdplugin.C, spiderplugin.C, phiplugin.C, msmsplugin.C, mol2plugin.C, mdfplugin.C, mapplugin.C, dxplugin.C, carplugin.c, bgfplugin.C, avsplugin.C, abinitplugin.c
- little_endian
: abinitplugin.c
- lookup_keyword()
: xsfplugin.C
- m -
- M_PI
: vaspplugin.h, gromacsplugin.C, fs4plugin.C, dsn6plugin.C, ccp4plugin.C, brixplugin.C, abinitplugin.c
- M_PI_2
: xsfplugin.C, tngplugin.C, lammpsyamlplugin.c, lammpsplugin.c, jsplugin.c, Gromacs.h, dlpolyplugin.c, dcdplugin.c, cubeplugin.C
- main()
: main.c
- MAJORITY_RULE
: ply.h
- make_lower()
: hoomdplugin.c
- mapgets()
: mapplugin.C
- matches_rule_name()
: ply.h, ply.c
- MAX
: situsplugin.C, lammpsyamlplugin.c, lammpsplugin.c
- MAX_COLUMNS
: pdbxplugin.C
- MAX_G96_LINE
: Gromacs.h
- MAX_GRO_LINE
: Gromacs.h
- MAX_LMPEXC_MSG
: lmplugin.C
- MAX_MDIO_TITLE
: Gromacs.h
- MAX_NUM_WAVE
: gaussianplugin.h
- MAX_OPTIONAL_AUTH_FIELDS
: pdbxplugin.C
- MAX_TRX_TITLE
: Gromacs.h
- MAX_VMD_NAME
: lmplugin.C
- MAXATOMTYPES
: vaspplugin.h
- MAXBONDS
: xbgfplugin.C
- MAXIMUM_RULE
: ply.h
- MDFMT_G96
: Gromacs.h
- MDFMT_GRO
: Gromacs.h
- MDFMT_TRJ
: Gromacs.h
- MDFMT_TRR
: Gromacs.h
- MDFMT_XTC
: Gromacs.h
- MDIO_BADEXTENSION
: Gromacs.h
- MDIO_BADFORMAT
: Gromacs.h
- MDIO_BADMALLOC
: Gromacs.h
- MDIO_BADPARAMS
: Gromacs.h
- MDIO_BADPRECISION
: Gromacs.h
- MDIO_CANTCLOSE
: Gromacs.h
- MDIO_CANTOPEN
: Gromacs.h
- mdio_close()
: Gromacs.h
- MDIO_EOF
: Gromacs.h
- mdio_errcode
: Gromacs.h
- mdio_errdescs
: Gromacs.h
- mdio_errmsg()
: Gromacs.h
- mdio_errno()
: Gromacs.h
- mdio_fmtexts
: Gromacs.h
- mdio_header()
: Gromacs.h
- MDIO_IOERROR
: Gromacs.h
- MDIO_MAX_ERRVAL
: Gromacs.h
- mdio_open()
: Gromacs.h
- MDIO_READ
: Gromacs.h
- mdio_readbox()
: Gromacs.h
- mdio_readline()
: Gromacs.h
- mdio_seterror()
: Gromacs.h
- MDIO_SIZEERROR
: Gromacs.h
- MDIO_SUCCESS
: Gromacs.h
- mdio_timeskip()
: Gromacs.h
- mdio_timestep()
: Gromacs.h
- mdio_tsfree()
: Gromacs.h
- MDIO_UNKNOWNERROR
: Gromacs.h
- MDIO_UNKNOWNFMT
: Gromacs.h
- MDIO_WRITE
: Gromacs.h
- MDIO_WRONGFORMAT
: Gromacs.h
- MIN
: tprplugin.C, situsplugin.C, lammpsyamlplugin.c, lammpsplugin.c
- MINIMUM_RULE
: ply.h
- mirror()
: qmplugin.h
- MoCoeff
: orcaplugin.C
- modify_rule_ply()
: ply.h, ply.c
- MOLFILE_ALTLOC
: molfile_plugin.h
- MOLFILE_ATOMICNUMBER
: molfile_plugin.h
- MOLFILE_BADOPTIONS
: molfile_plugin.h
- MOLFILE_BFACTOR
: molfile_plugin.h
- MOLFILE_BIGBUFSIZ
: molfile_plugin.h
- MOLFILE_BONDSSPECIAL
: molfile_plugin.h
- MOLFILE_BUFSIZ
: molfile_plugin.h
- MOLFILE_CAPCYL
: molfile_plugin.h
- MOLFILE_CHARGE
: molfile_plugin.h
- MOLFILE_COLOR
: molfile_plugin.h
- MOLFILE_CONE
: molfile_plugin.h
- MOLFILE_CONVERTER_PLUGIN_TYPE
: molfile_plugin.h
- MOLFILE_CYLINDER
: molfile_plugin.h
- MOLFILE_DIRECTIO_MAX_BLOCK_SIZE
: molfile_plugin.h
- MOLFILE_DIRECTIO_MIN_BLOCK_SIZE
: molfile_plugin.h
- MOLFILE_EOF
: molfile_plugin.h
- MOLFILE_ERROR
: molfile_plugin.h
- molfile_graphics_list
: stlplugin.C, molemeshplugin.C
- molfile_graphics_type
: molfile_plugin.h
- MOLFILE_INSERTION
: molfile_plugin.h
- MOLFILE_LINE
: molfile_plugin.h
- MOLFILE_MASS
: molfile_plugin.h
- MOLFILE_MAXWAVEPERTS
: molfile_plugin.h
- MOLFILE_NOOPTIONS
: molfile_plugin.h
- MOLFILE_NORMS
: molfile_plugin.h
- MOLFILE_NOSTRUCTUREDATA
: molfile_plugin.h
- MOLFILE_NUMATOMS_NONE
: molfile_plugin.h
- MOLFILE_NUMATOMS_UNKNOWN
: molfile_plugin.h
- MOLFILE_OCCUPANCY
: molfile_plugin.h
- MOLFILE_PLUGIN_TYPE
: molfile_plugin.h
- MOLFILE_POINT
: molfile_plugin.h
- molfile_qm_charge_type
: molfile_plugin.h
- molfile_qm_timestep_metadata_t
: molfile_plugin.h
- molfile_qm_wavefunc_type
: molfile_plugin.h
- MOLFILE_QMCHARGE_ESP
: molfile_plugin.h
- MOLFILE_QMCHARGE_LOWDIN
: molfile_plugin.h
- MOLFILE_QMCHARGE_MULLIKEN
: molfile_plugin.h
- MOLFILE_QMCHARGE_NPA
: molfile_plugin.h
- MOLFILE_QMCHARGE_UNKNOWN
: molfile_plugin.h
- MOLFILE_QMSTATUS_FILE_TRUNCATED
: molfile_plugin.h
- MOLFILE_QMSTATUS_OPT_CONV
: molfile_plugin.h
- MOLFILE_QMSTATUS_OPT_NOT_CONV
: molfile_plugin.h
- MOLFILE_QMSTATUS_SCF_NOT_CONV
: molfile_plugin.h
- MOLFILE_QMSTATUS_UNKNOWN
: molfile_plugin.h
- MOLFILE_QMTS_GRADIENT
: molfile_plugin.h
- MOLFILE_QMTS_NOOPTIONS
: molfile_plugin.h
- MOLFILE_QMTS_SCFITER
: molfile_plugin.h
- MOLFILE_RADIUS
: molfile_plugin.h
- MOLFILE_RUNTYPE_DYNAMICS
: molfile_plugin.h
- MOLFILE_RUNTYPE_ENERGY
: molfile_plugin.h
- MOLFILE_RUNTYPE_GRADIENT
: molfile_plugin.h
- MOLFILE_RUNTYPE_HESSIAN
: molfile_plugin.h
- MOLFILE_RUNTYPE_MEX
: molfile_plugin.h
- MOLFILE_RUNTYPE_OPTIMIZE
: molfile_plugin.h
- MOLFILE_RUNTYPE_PROPERTIES
: molfile_plugin.h
- MOLFILE_RUNTYPE_SADPOINT
: molfile_plugin.h
- MOLFILE_RUNTYPE_SURFACE
: molfile_plugin.h
- MOLFILE_RUNTYPE_UNKNOWN
: molfile_plugin.h
- MOLFILE_SCFTYPE_FF
: molfile_plugin.h
- MOLFILE_SCFTYPE_GVB
: molfile_plugin.h
- MOLFILE_SCFTYPE_MCSCF
: molfile_plugin.h
- MOLFILE_SCFTYPE_NONE
: molfile_plugin.h
- MOLFILE_SCFTYPE_RHF
: molfile_plugin.h
- MOLFILE_SCFTYPE_ROHF
: molfile_plugin.h
- MOLFILE_SCFTYPE_UHF
: molfile_plugin.h
- MOLFILE_SCFTYPE_UNKNOWN
: molfile_plugin.h
- MOLFILE_SPHERE
: molfile_plugin.h
- MOLFILE_SUCCESS
: hoomdplugin.c, molfile_plugin.h
- MOLFILE_TEXT
: molfile_plugin.h
- molfile_timestep_metadata_t
: molfile_plugin.h
- MOLFILE_TRIANGLE
: molfile_plugin.h
- MOLFILE_TRICOLOR
: molfile_plugin.h
- MOLFILE_TRINORM
: molfile_plugin.h
- MOLFILE_WAVE_BOYS
: molfile_plugin.h
- MOLFILE_WAVE_CANON
: molfile_plugin.h
- MOLFILE_WAVE_CINATUR
: molfile_plugin.h
- MOLFILE_WAVE_GEMINAL
: molfile_plugin.h
- MOLFILE_WAVE_MCSCFNAT
: molfile_plugin.h
- MOLFILE_WAVE_MCSCFOPT
: molfile_plugin.h
- MOLFILE_WAVE_MOAO
: molfile_plugin.h
- MOLFILE_WAVE_NAO
: molfile_plugin.h
- MOLFILE_WAVE_NATO
: molfile_plugin.h
- MOLFILE_WAVE_NBO
: molfile_plugin.h
- MOLFILE_WAVE_NHO
: molfile_plugin.h
- MOLFILE_WAVE_NLMO
: molfile_plugin.h
- MOLFILE_WAVE_PIPEK
: molfile_plugin.h
- MOLFILE_WAVE_PNAO
: molfile_plugin.h
- MOLFILE_WAVE_PNBO
: molfile_plugin.h
- MOLFILE_WAVE_PNHO
: molfile_plugin.h
- MOLFILE_WAVE_PNLMO
: molfile_plugin.h
- MOLFILE_WAVE_RUEDEN
: molfile_plugin.h
- MOLFILE_WAVE_UNKNOWN
: molfile_plugin.h
- molid
: vtfplugin.c
- MRC_TYPE_BYTE
: ccp4plugin.C
- MRC_TYPE_FLOAT
: ccp4plugin.C
- MRC_TYPE_FLOAT2
: ccp4plugin.C
- MRC_TYPE_SHORT
: ccp4plugin.C
- MRC_TYPE_SHORT2
: ccp4plugin.C
- MRC_TYPE_UCHAR3
: ccp4plugin.C
- MRC_TYPE_USHORT
: ccp4plugin.C
- msmsgets()
: msmsplugin.C
- multmatrix()
: qmplugin.h
- multpoint3d()
: qmplugin.h
- my_alloc()
: ply.c
- my_read_pdb_record()
: webpdbplugin.c
- myalloc
: ply.h
- myFclose
: lammpsyamlplugin.c, lammpsplugin.c
- myFgets
: lammpsyamlplugin.c, lammpsplugin.c
- myFopen
: lammpsyamlplugin.c, lammpsplugin.c
- myFprintf
: lammpsyamlplugin.c, lammpsplugin.c
- myintptrtype
: jsplugin.c
- myRewind
: lammpsyamlplugin.c, lammpsplugin.c
- n -
- o -
- old_type_names
: ply.c
- only_numbers()
: orcaplugin.C
- open_amber_cdf_read()
: netcdfplugin.c
- open_avsfield_read()
: avsplugin.C
- open_babel_read()
: babelplugin.c
- open_basis_read()
: basissetplugin.c
- open_bgf_read()
: bgfplugin.C
- open_bgf_write()
: bgfplugin.C
- open_binpos_read()
: binposplugin.c
- open_binpos_write()
: binposplugin.c
- open_biomocca_read()
: biomoccaplugin.C
- open_brix_read()
: brixplugin.C
- open_car_read()
: carplugin.c
- open_ccp4_read()
: ccp4plugin.C
- open_cdf_read()
: netcdfplugin.c
- open_cor_file()
: corplugin.c
- open_cor_read()
: corplugin.c
- open_cpmd_read()
: cpmdplugin.c
- open_cpmdlog_read()
: cpmdlogplugin.c
- open_crd_read()
: crdplugin.c
- open_crd_write()
: crdplugin.c
- open_cube_read()
: cubeplugin.C
- open_dcd_read()
: dcdplugin.c
- open_dcd_write()
: dcdplugin.c
- open_dlpoly_config_read()
: dlpolyplugin.c
- open_dlpoly_read()
: dlpolyplugin.c
- open_dsn6_read()
: dsn6plugin.C
- open_dx_read()
: dxplugin.C
- open_dx_write()
: dxplugin.C
- open_edm_read()
: edmplugin.C
- open_edm_write()
: edmplugin.C
- open_file_read()
: webpdbplugin.c, stlplugin.C, raster3dplugin.C, plyplugin.C, offplugin.C, msmsplugin.C, molemeshplugin.C, graspplugin.C, amiraplugin.C, abinitplugin.c
- open_file_write()
: pdbxplugin.C, pdbplugin.c, abinitplugin.c
- open_for_writing_ply()
: ply.h, ply.c
- open_fs4_read()
: fs4plugin.C
- open_g96_read()
: gromacsplugin.C
- open_gamess_read()
: gamessplugin.c
- open_gaussian_read()
: gaussianplugin.c
- open_grd_read()
: grdplugin.C
- open_grid_read()
: gridplugin.C
- open_gro_read()
: gromacsplugin.C
- open_gro_write()
: gromacsplugin.C
- open_hoomd_read()
: hoomdplugin.c
- open_hoomd_write()
: hoomdplugin.c
- open_js_read()
: jsplugin.c
- open_js_write()
: jsplugin.c
- open_lammps_read()
: lammpsplugin.c
- open_lammps_write()
: lammpsplugin.c
- open_lammpsyaml_read()
: lammpsyamlplugin.c
- open_lammpsyaml_write()
: lammpsyamlplugin.c
- open_map_read()
: mapplugin.C
- open_mdf_read()
: mdfplugin.C
- open_mmcif_read()
: mmcif.C
- open_mmcif_write()
: mmcif.C
- open_mmtk_cdf_read()
: netcdfplugin.c
- open_mol2_read()
: mol2plugin.C
- open_mol2_write()
: mol2plugin.C
- open_molden_read()
: moldenplugin.c
- open_namdbin_read()
: namdbinplugin.c
- open_namdbin_write()
: namdbinplugin.c
- open_orca_read()
: orcaplugin.C
- open_parm7_file()
: ReadPARM7.h
- open_parm7_read()
: parm7plugin.C
- open_parm_read()
: parmplugin.C
- open_pbeq_read()
: pbeqplugin.C
- open_pdb_read()
: pdbplugin.c, babelplugin.c
- open_pdbx_read()
: pdbxplugin.C
- open_phi_read()
: phiplugin.C
- open_plt_read()
: pltplugin.C
- open_pqr_read()
: pqrplugin.c
- open_pqr_write()
: pqrplugin.c
- open_psf_read()
: psfplugin.c
- open_psf_write()
: psfplugin.c
- open_qcschema_read()
: qcschemaplugin.c
- open_read()
: lmplugin.C
- open_rst_read()
: rst7plugin.c
- open_rst_write()
: rst7plugin.c
- open_situs_read()
: situsplugin.C
- open_situs_write()
: situsplugin.C
- open_spider_read()
: spiderplugin.C
- open_tinker_read()
: tinkerplugin.c
- open_tng_read()
: tngplugin.C
- open_tng_write()
: tngplugin.C
- open_tpr_read()
: tprplugin.C
- open_trr_read()
: gromacsplugin.C
- open_trr_write()
: gromacsplugin.C
- open_uhbd_read()
: uhbdplugin.C
- open_vasp5xdatcar_read()
: vasp5xdatcarplugin.c
- open_vaspchgcar_read()
: vaspchgcarplugin.c
- open_vaspoutcar_read()
: vaspoutcarplugin.c
- open_vaspparchg_read()
: vaspparchgplugin.c
- open_vaspposcar_read()
: vaspposcarplugin.c
- open_vaspposcar_write()
: vaspposcarplugin.c
- open_vaspxdatcar_read()
: vaspxdatcarplugin.c
- open_vaspxml_read()
: vaspxmlplugin.c
- open_vtk_read()
: vtkplugin.C
- open_xbgf_read()
: xbgfplugin.C
- open_xbgf_write()
: xbgfplugin.C
- open_xsf_read()
: xsfplugin.C
- open_xyz_read()
: xyzplugin.c
- open_xyz_write()
: xyzplugin.c
- openbabel11filetypenames
: babelplugin.c
- openbabel11filetypes
: babelplugin.c
- openbabel11type_from_name()
: babelplugin.c
- ORBSPERBLOCK
: cpmdlogplugin.c
- ORCA3
: orcaplugin.C
- ORCA4
: orcaplugin.C
- OTHER_PROP
: ply.c
- OtherData
: ply.h
- OtherElem
: ply.h
- p -
- P_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- parm7
: ReadPARM7.h
- parmstruct
: ReadPARM7.h, ReadPARM.h
- parse_parm7_atomicnumber()
: ReadPARM7.h
- parse_parm7_atoms()
: ReadPARM7.h
- parse_parm7_atype()
: ReadPARM7.h
- parse_parm7_bonds()
: ReadPARM7.h
- parse_parm7_charge()
: ReadPARM7.h
- parse_parm7_mass()
: ReadPARM7.h
- parse_parm7_resnames()
: ReadPARM7.h
- parse_parm7_respointers()
: ReadPARM7.h
- parse_pdbx_graphics_data()
: pdbxplugin.C
- parse_pdbx_ihm_restraints_data()
: pdbxplugin.C
- parse_pdbx_ihm_sphere_data()
: pdbxplugin.C
- parse_static_data()
: orcaplugin.C, gaussianplugin.c, gamessplugin.c, cpmdlogplugin.c
- parseNumberAtoms()
: pdbxplugin.C
- parseStructure()
: pdbxplugin.C
- particle_int_t
: lmplugin.C
- pass_keyline()
: qmplugin.h
- PBC_2D
: carplugin.c
- PBC_OFF
: carplugin.c
- PBC_ON
: carplugin.c
- PDB_ATOM
: readpdb.h
- PDB_BUFFER_LENGTH
: readpdb.h
- PDB_CONECT
: readpdb.h
- PDB_CRYST1
: readpdb.h
- PDB_END
: readpdb.h
- PDB_EOF
: readpdb.h
- PDB_HEADER
: readpdb.h
- pdb_read()
: webpdbplugin.c
- PDB_RECORD_LENGTH
: readpdb.h
- PDB_REMARK
: readpdb.h
- PDB_UNKNOWN
: readpdb.h
- PDBBAD
: pdbplugin.c
- pdbxParser
: pdbxplugin.C
- pdbxWriter
: pdbxplugin.C
- phigets()
: phiplugin.C
- plugin
: xyzplugin.c, xsfplugin.C, xbgfplugin.C, webpdbplugin.c, vaspxmlplugin.c, vaspxdatcarplugin.c, vaspposcarplugin.c, vaspparchgplugin.c, vaspoutcarplugin.c, vaspchgcarplugin.c, vasp5xdatcarplugin.c, uhbdplugin.C, tinkerplugin.c, stlplugin.C, spiderplugin.C, situsplugin.C, rst7plugin.c, raster3dplugin.C, qcschemaplugin.c, psfplugin.c, pqrplugin.c, plyplugin.C, pltplugin.C, phiplugin.C, pdbxplugin.C, pdbplugin.c, pbeqplugin.C, parmplugin.C, parm7plugin.C, orcaplugin.C, offplugin.C, netcdfplugin.c, namdbinplugin.c, msmsplugin.C, molemeshplugin.C, moldenplugin.c, mol2plugin.C, mmcif.C, mapplugin.C, lammpsyamlplugin.c, lammpsplugin.c, jsplugin.c, hoomdplugin.c, gridplugin.C, grdplugin.C, graspplugin.C, gamessplugin.c, fs4plugin.C, edmplugin.C, dsn6plugin.C, dcdplugin.c, crdplugin.c, cpmdplugin.c, corplugin.c, ccp4plugin.C, carplugin.c, brixplugin.C, biomoccaplugin.C, binposplugin.c, bgfplugin.C, basissetplugin.c, avsplugin.C, amiraplugin.C
- plugins
: babelplugin.c
- PLY_ASCII
: ply.h
- PLY_BINARY_BE
: ply.h
- PLY_BINARY_LE
: ply.h
- ply_close()
: ply.c
- ply_describe_property()
: ply.h, ply.c
- PLY_ERROR
: ply.h
- ply_get_element()
: ply.h, ply.c
- ply_get_other_properties()
: ply.c
- ply_get_property()
: ply.h, ply.c
- PLY_LIST
: ply.h
- PLY_OKAY
: ply.h
- ply_open_for_reading()
: ply.c
- ply_read()
: ply.c
- PLY_SCALAR
: ply.h
- PLY_STRING
: ply.h
- ply_type_size
: ply.c
- ply_write()
: ply.c
- PlyElement
: ply.h
- PlyFile
: ply.h
- PlyOtherElems
: ply.h
- PlyOtherProp
: ply.h
- PlyProperty
: ply.h
- PlyPropRules
: ply.h
- PlyRuleList
: ply.h
- POT_read_volumetric_data()
: abinitplugin.c
- POT_read_volumetric_metadata()
: abinitplugin.c
- POTENTIALS
: graspplugin.C
- PQR_ATOM
: pqrplugin.c
- PQR_CRYST1
: pqrplugin.c
- PQR_END
: pqrplugin.c
- PQR_EOF
: pqrplugin.c
- PQR_ERROR
: pqrplugin.c
- PQR_RECORD_LENGTH
: pqrplugin.c
- PQR_REMARK
: pqrplugin.c
- PQR_UNKNOWN
: pqrplugin.c
- print_dcderror()
: dcdplugin.c
- print_input_data()
: orcaplugin.C, gamessplugin.c, basissetplugin.c
- print_matrix4()
: qmplugin.h
- PRINTERR
: orcaplugin.C, hoomdplugin.c, gaussianplugin.c, gamessplugin.c, cpmdlogplugin.c, basissetplugin.c
- PROPERTY_1
: graspplugin.C
- PROPERTY_2
: graspplugin.C
- psf_get_angles()
: psfplugin.c
- psf_get_bonds()
: psfplugin.c
- psf_get_dihedrals_impropers()
: psfplugin.c
- PSF_RECORD_LENGTH
: psfplugin.c
- psf_start_block()
: psfplugin.c
- pte_label
: periodic_table.h
- pte_mass
: periodic_table.h
- pte_vdw_radius
: periodic_table.h
- put_element_ply()
: ply.h, ply.c
- put_element_setup_ply()
: ply.h, ply.c
- put_other_elements_ply()
: ply.h, ply.c
- put_trx_int()
: Gromacs.h
- put_trx_real()
: Gromacs.h
- put_trx_string()
: Gromacs.h
- q -
- r -
- RADTODEG
: qmplugin.h
- RANDOM_RULE
: ply.h
- rcsbmsg
: webpdbplugin.c
- RDME_RADIUS_SCALE
: lmplugin.C
- READ
: dcdplugin.c
- read_amber_cdf_timestep()
: netcdfplugin.c
- read_angles()
: psfplugin.c
- read_atomtypes()
: tprplugin.C
- read_avsfield_data()
: avsplugin.C
- read_avsfield_metadata()
: avsplugin.C
- read_basis_metadata()
: basissetplugin.c
- read_basis_rundata()
: basissetplugin.c
- read_bgf_bonds()
: bgfplugin.C
- read_bgf_bonds_aux()
: bgfplugin.C
- read_bgf_structure()
: bgfplugin.C
- read_bgf_timestep()
: bgfplugin.C
- read_binary_dx_data()
: dxplugin.C
- read_biomocca_data()
: biomoccaplugin.C
- read_biomocca_metadata()
: biomoccaplugin.C
- read_bonds()
: webpdbplugin.c, psfplugin.c, pdbxplugin.C, pdbplugin.c, lmplugin.C
- read_brix_data()
: brixplugin.C
- read_brix_metadata()
: brixplugin.C
- read_car_coordinates()
: carplugin.c
- read_car_structure()
: carplugin.c
- read_car_structure_line()
: carplugin.c
- read_car_timestep()
: carplugin.c
- read_ccp4_data()
: ccp4plugin.C
- read_ccp4_metadata()
: ccp4plugin.C
- read_cdf_structure()
: netcdfplugin.c
- read_cdf_timestep()
: netcdfplugin.c
- read_charmm_4dim()
: dcdplugin.c
- read_charmm_extrablock()
: dcdplugin.c
- read_cmap()
: tprplugin.C
- read_coeff_block()
: gamessplugin.c
- read_cor_structure()
: corplugin.c
- read_cor_timestep()
: corplugin.c
- read_cpmd_structure()
: cpmdplugin.c
- read_cpmd_timestep()
: cpmdplugin.c
- read_cpmdlog_metadata()
: cpmdlogplugin.c
- read_cpmdlog_rundata()
: cpmdlogplugin.c
- read_cpmdlog_structure()
: cpmdlogplugin.c
- read_crd_timestep()
: crdplugin.c
- read_cube_data()
: cubeplugin.C
- read_cube_metadata()
: cubeplugin.C
- read_cube_structure()
: cubeplugin.C
- read_cube_timestep()
: cubeplugin.C
- read_datasource()
: avsplugin.C
- read_dcdheader()
: dcdplugin.c
- read_dcdstep()
: dcdplugin.c
- read_dlpoly_config_structure()
: dlpolyplugin.c
- read_dlpoly_config_timestep()
: dlpolyplugin.c
- read_dlpoly_structure()
: dlpolyplugin.c
- read_dlpoly_timestep()
: dlpolyplugin.c
- read_dsn6_data()
: dsn6plugin.C
- read_dsn6_metadata()
: dsn6plugin.C
- read_dx_data()
: dxplugin.C
- read_dx_metadata()
: dxplugin.C
- read_edm_data()
: edmplugin.C
- read_edm_metadata()
: edmplugin.C
- read_first_frame()
: orcaplugin.C, gaussianplugin.c, gamessplugin.c, cpmdlogplugin.c
- read_fixed_atoms()
: dcdplugin.c
- read_fs4_data()
: fs4plugin.C
- read_fs4_metadata()
: fs4plugin.C
- read_g96_structure()
: gromacsplugin.C
- read_g96_timestep()
: gromacsplugin.C
- read_gamess_metadata()
: gamessplugin.c
- read_gamess_rundata()
: gamessplugin.c
- read_gamess_structure()
: gamessplugin.c
- read_gaussian_metadata()
: gaussianplugin.c
- read_gaussian_rundata()
: gaussianplugin.c
- read_gaussian_structure()
: gaussianplugin.c
- read_geom_block()
: moldenplugin.c
- read_grd_data()
: grdplugin.C
- read_grd_metadata()
: grdplugin.C
- read_grid_data()
: gridplugin.C
- read_grid_metadata()
: gridplugin.C
- read_gro_molecule_metadata()
: gromacsplugin.C
- read_gro_structure()
: gromacsplugin.C
- read_gro_timestep()
: gromacsplugin.C
- read_groups()
: tprplugin.C
- read_hoomd_angles()
: hoomdplugin.c
- read_hoomd_bonds()
: hoomdplugin.c
- read_hoomd_structure()
: hoomdplugin.c
- read_hoomd_timestep()
: hoomdplugin.c
- read_js_angles()
: jsplugin.c
- read_js_bonds()
: jsplugin.c
- read_js_structure()
: jsplugin.c
- read_js_timestep()
: jsplugin.c
- read_js_timestep_index_offsets()
: jsplugin.c
- read_js_timestep_pagealign_size()
: jsplugin.c
- read_lammps_structure()
: lammpsplugin.c
- read_lammps_timestep()
: lammpsplugin.c
- read_lammpsyaml_structure()
: lammpsyamlplugin.c
- read_lammpsyaml_timestep()
: lammpsyamlplugin.c
- read_localized_orbitals()
: gamessplugin.c
- read_map_data()
: mapplugin.C
- read_map_metadata()
: mapplugin.C
- read_mdf_bonds()
: mdfplugin.C
- read_mdf_structure()
: mdfplugin.C
- read_mdf_structure_line()
: mdfplugin.C
- read_mmcif_structure()
: mmcif.C
- read_mmcif_timestep()
: mmcif.C
- read_mmtk_cdf_structure()
: netcdfplugin.c
- read_mmtk_cdf_timestep()
: netcdfplugin.c
- read_mol2()
: mol2plugin.C
- read_mol2_bonds()
: mol2plugin.C
- read_mol2_bonds_aux()
: mol2plugin.C
- read_mol2_timestep()
: mol2plugin.C
- read_molden_metadata()
: moldenplugin.c
- read_molden_rundata()
: moldenplugin.c
- read_molden_structure()
: moldenplugin.c
- read_molecular_orbitals()
: qcschemaplugin.c, moldenplugin.c
- read_molecule_metadata()
: webpdbplugin.c, pdbplugin.c
- read_next_timestep()
: webpdbplugin.c, pdbplugin.c, namdbinplugin.c, dcdplugin.c, binposplugin.c, babelplugin.c, abinitplugin.c
- read_orca_metadata()
: orcaplugin.C
- read_orca_rundata()
: orcaplugin.C
- read_orca_structure()
: orcaplugin.C
- read_parm7_bonds()
: parm7plugin.C
- read_parm7_flag()
: ReadPARM7.h
- read_parm7_header()
: ReadPARM7.h
- read_parm7_structure()
: parm7plugin.C
- read_parm_bonds()
: parmplugin.C
- read_parm_structure()
: parmplugin.C
- read_pbeq_data()
: pbeqplugin.C
- read_pbeq_metadata()
: pbeqplugin.C
- read_pdb_record()
: readpdb.h
- read_pdb_structure()
: webpdbplugin.c, pdbplugin.c, babelplugin.c
- read_pdbx_structure()
: pdbxplugin.C
- read_pdbx_timestep()
: pdbxplugin.C
- read_phi_data()
: phiplugin.C
- read_phi_metadata()
: phiplugin.C
- read_plt_data()
: pltplugin.C
- read_plt_metadata()
: pltplugin.C
- read_ply()
: ply.h, ply.c
- read_pqr_record()
: pqrplugin.c
- read_pqr_structure()
: pqrplugin.c
- read_pqr_timestep()
: pqrplugin.c
- read_psf()
: psfplugin.c
- read_qcschema_metadata()
: qcschemaplugin.c
- read_qcschema_rundata()
: qcschemaplugin.c
- read_qcschema_structure()
: qcschemaplugin.c
- read_qm_timestep_metadata()
: qcschemaplugin.c, orcaplugin.C, moldenplugin.c
- read_rawgraphics()
: stlplugin.C, raster3dplugin.C, plyplugin.C, pdbxplugin.C, offplugin.C, msmsplugin.C, molemeshplugin.C, graspplugin.C, amiraplugin.C
- read_rst_timestep()
: rst7plugin.c
- read_shell_primitives()
: gamessplugin.c, basissetplugin.c
- read_situs_data()
: situsplugin.C
- read_situs_metadata()
: situsplugin.C
- read_spider_data()
: spiderplugin.C
- read_spider_metadata()
: spiderplugin.C
- read_structure()
: lmplugin.C, abinitplugin.c
- read_timestep()
: qcschemaplugin.c, orcaplugin.C, moldenplugin.c, lmplugin.C
- read_timestep_metadata()
: tngplugin.C, qcschemaplugin.c, orcaplugin.C, moldenplugin.c
- read_tinker_structure()
: tinkerplugin.c
- read_tinker_timestep()
: tinkerplugin.c
- read_tng_bonds()
: tngplugin.C
- read_tng_structure()
: tngplugin.C
- read_tng_timestep()
: tngplugin.C
- read_tpr_angles()
: tprplugin.C
- read_tpr_bonds()
: tprplugin.C
- read_tpr_structure()
: tprplugin.C
- read_tpr_timestep()
: tprplugin.C
- read_tpr_timestep_metadata()
: tprplugin.C
- read_trr_timestep()
: gromacsplugin.C
- read_uhbd_data()
: uhbdplugin.C
- read_uhbd_metadata()
: uhbdplugin.C
- read_vasp5xdatcar_structure()
: vasp5xdatcarplugin.c
- read_vasp5xdatcar_timestep()
: vasp5xdatcarplugin.c
- read_vaspchgcar_data()
: vaspchgcarplugin.c
- read_vaspchgcar_metadata()
: vaspchgcarplugin.c
- read_vaspoutcar_structure()
: vaspoutcarplugin.c
- read_vaspoutcar_timestep()
: vaspoutcarplugin.c
- read_vaspparchg_data()
: vaspparchgplugin.c
- read_vaspparchg_metadata()
: vaspparchgplugin.c
- read_vaspposcar_structure()
: vaspposcarplugin.c
- read_vaspposcar_timestep()
: vaspposcarplugin.c
- read_vaspxdatcar_structure()
: vaspxdatcarplugin.c
- read_vaspxdatcar_timestep()
: vaspxdatcarplugin.c
- read_vaspxml_structure()
: vaspxmlplugin.c
- read_vaspxml_timestep()
: vaspxmlplugin.c
- read_volumetric_data()
: amiraplugin.C, abinitplugin.c
- read_volumetric_metadata()
: amiraplugin.C, abinitplugin.c
- read_vtk_data()
: vtkplugin.C
- read_vtk_metadata()
: vtkplugin.C
- read_wave_coeffs()
: qcschemaplugin.c, moldenplugin.c
- read_xbgf_bonds()
: xbgfplugin.C
- read_xbgf_bonds_aux()
: xbgfplugin.C
- read_xbgf_molecule_metadata()
: xbgfplugin.C
- read_xbgf_structure()
: xbgfplugin.C
- read_xbgf_timestep()
: xbgfplugin.C
- read_xsf_data()
: xsfplugin.C
- read_xsf_metadata()
: xsfplugin.C
- read_xsf_structure()
: xsfplugin.C
- read_xsf_timestep()
: xsfplugin.C
- read_xyz_structure()
: xyzplugin.c
- read_xyz_timestep()
: xyzplugin.c
- readAngleBonds()
: pdbxplugin.C
- readBonds()
: pdbxplugin.C
- readff()
: tprplugin.C
- readparams()
: tprplugin.h
- readRMSDBonds()
: pdbxplugin.C
- readtoeoln()
: ReadPARM.h
- readtprAfterPrecision()
: tprplugin.C
- rebuild_table()
: hash.c
- rebuild_table_int()
: inthash.c
- recreate_command_line()
: ply.h, ply.c
- RECSCALE32BIT
: dcdplugin.c
- RECSCALE64BIT
: dcdplugin.c
- RECSCALEMAX
: dcdplugin.c
- RECTILINEAR
: avsplugin.C
- reduce()
: orcaplugin.C
- register_cb()
: main.c
- remap_field()
: lammpsyamlplugin.c, lammpsplugin.c
- replace_wavefunction()
: qmplugin.h
- rot()
: qmplugin.h
- rule_name_list
: ply.c
- RuleName
: ply.c
- RUNTYP_DYNAMICS
: gaussianplugin.h
- RUNTYP_ENERGY
: gaussianplugin.h
- RUNTYP_HESSIAN
: gaussianplugin.h
- RUNTYP_OPTIMIZE
: gaussianplugin.h
- RUNTYP_PROPERTIES
: gaussianplugin.h
- RUNTYP_SADPOINT
: gaussianplugin.h
- RUNTYP_SURFACE
: gaussianplugin.h
- RUNTYP_UNKNOWN
: gaussianplugin.h
- runtypes
: gaussianplugin.c, cpmdlogplugin.c
- s -
- S_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- SAFE_CALLOC
: hoomdplugin.c, gaussianplugin.c, cpmdlogplugin.c
- SAFE_FREE
: hoomdplugin.c, gaussianplugin.c, cpmdlogplugin.c
- SAME_RULE
: ply.h
- SAVELEN
: tprplugin.C
- scale()
: qmplugin.h
- SCFTYP_FF
: gaussianplugin.h
- SCFTYP_GVB
: gaussianplugin.h
- SCFTYP_MCSCF
: gaussianplugin.h
- SCFTYP_RHF
: gaussianplugin.h
- SCFTYP_ROHF
: gaussianplugin.h
- SCFTYP_UHF
: gaussianplugin.h
- SCFTYP_UNKNOWN
: gaussianplugin.h
- scftypes
: gaussianplugin.c, cpmdlogplugin.c
- SECTION_CLOSE
: hoomdplugin.c
- SECTION_OPEN
: hoomdplugin.c
- SECTION_WRITE_ATOMIC
: hoomdplugin.c
- set_atom_attributes()
: netcdfplugin.c
- Set_Colour()
: graspplugin.C
- set_prop_rules_ply()
: ply.h, ply.c
- setup_element_read_ply()
: ply.h, ply.c
- setup_other_props()
: ply.c
- setup_property_ply()
: ply.h, ply.c
- sfiletype
: main.c
- sfree()
: vtfplugin.c
- shellsymm_int()
: gaussianplugin.c, cpmdlogplugin.c
- Shelltype
: orcaplugin.C
- shelltype_int()
: qcschemaplugin.c, orcaplugin.C, moldenplugin.c, gamessplugin.c, basissetplugin.c
- SHORTWORD
: graspplugin.C
- show_msg
: webpdbplugin.c
- site_int_t
: lmplugin.C
- situs_voxel_value_interpolate()
: situsplugin.C
- situs_voxel_value_interpolate_from_coord()
: situsplugin.C
- situs_voxel_value_safe()
: situsplugin.C
- skip_dcdstep()
: dcdplugin.c
- skipNextWord()
: pdbxplugin.C
- SMALL
: lammpsyamlplugin.c, lammpsplugin.c, hoomdplugin.c
- SP_P_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- SP_S_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- SP_SHELL
: qmplugin.h
- SPD_D_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- SPD_P_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- SPD_S_SHELL
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- SPD_SHELL
: qmplugin.h
- SPIN_ALPHA
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- SPIN_BETA
: qmplugin.h, gaussianplugin.c, cpmdlogplugin.c, basissetplugin.c
- split()
: orcaplugin.C
- splugin
: main.c
- start_props_ply()
: ply.h, ply.c
- StartType
: ply.h
- STATUS_BROKEN_OFF
: gaussianplugin.c, cpmdlogplugin.c
- STATUS_CONVERGED
: gaussianplugin.c, cpmdlogplugin.c
- STATUS_SCF_NOT_CONV
: gaussianplugin.c, cpmdlogplugin.c
- STATUS_TOO_MANY_STEPS
: gaussianplugin.c, cpmdlogplugin.c
- STATUS_UNKNOWN
: gaussianplugin.c, cpmdlogplugin.c
- STOPPED
: orcaplugin.C, gamessplugin.c, basissetplugin.c
- store_item()
: ply.c
- STORE_PROP
: ply.c
- string_add
: qcschema_json.c
- stringToFloat()
: pdbxplugin.C
- strip_white()
: Gromacs.h
- strip_whitespace()
: corplugin.c
- STRLEN
: tprplugin.C
- strnwscpy()
: fortread.h
- strnwscpy_shift()
: psfplugin.c
- strtoupper()
: qmplugin.h
- swap2_aligned()
: endianswap.h
- swap2_unaligned()
: endianswap.h
- swap4_aligned()
: endianswap.h
- swap4_unaligned()
: endianswap.h
- swap8_aligned()
: endianswap.h
- swap8_unaligned()
: endianswap.h
- symmetry_expand()
: qmplugin.h
- t -
- TableColums
: pdbxplugin.C
- thisline()
: qmplugin.h
- THISPLUGIN
: vtkplugin.C, mdfplugin.C, lammpsyamlplugin.c, lammpsplugin.c, hoomdplugin.c, gaussianplugin.c, dxplugin.C, cubeplugin.C, cpmdlogplugin.c
- TIMESTEP_INDEXED
: vtfplugin.c
- TIMESTEP_ORDERED
: vtfplugin.c
- TIMESTEP_VCFSTART
: vtfplugin.c
- tng_plugin
: tngplugin.C
- TNG_PLUGIN_MAJOR_VERSION
: tngplugin.C
- TNG_PLUGIN_MINOR_VERSION
: tngplugin.C
- TO_ANGSTROM
: lmplugin.C
- TOLERANCE
: situsplugin.C, edmplugin.C
- TORF
: gamessplugin.c, basissetplugin.c
- tpr_ivector()
: Gromacs.h
- tpr_plugin
: tprplugin.C
- tpr_rvector()
: Gromacs.h
- tpr_save_string()
: tprplugin.C
- tpr_string()
: Gromacs.h
- TRASH
: graspplugin.C
- trim()
: orcaplugin.C
- trimleft()
: qmplugin.h
- trimright()
: qmplugin.h
- trj_plugin
: gromacsplugin.C
- trr_plugin
: gromacsplugin.C
- TRUE
: tprplugin.C, qmplugin.h, gaussianplugin.h
- trx_double()
: Gromacs.h
- trx_header()
: Gromacs.h
- trx_int()
: Gromacs.h
- trx_long()
: Gromacs.h
- TRX_MAGIC
: Gromacs.h
- trx_real()
: Gromacs.h
- trx_rvector()
: Gromacs.h
- trx_string()
: Gromacs.h
- trx_timeskip()
: Gromacs.h
- trx_timestep()
: Gromacs.h
- type_names
: ply.c
- TYPE_SIZE
: pdbxplugin.C
- u -
- v -
- vasp_buildrotmat()
: vaspplugin.h
- vasp_plugindata_free()
: vaspplugin.h
- vasp_plugindata_malloc()
: vaspplugin.h
- vasp_timestep_unitcell()
: vaspplugin.h
- vcfplugin
: vtfplugin.c
- VECTOR
: graspplugin.C
- velinfo
: lammpsyamlplugin.c, lammpsplugin.c
- VERSION_MAJOR
: vtfplugin.c
- VERSION_MINOR
: vtfplugin.c
- vert_props
: plyplugin.C
- Vertex
: plyplugin.C
- VERTEXCOLOR
: graspplugin.C
- vmd_closedir()
: vmddir.h
- vmd_delete_file()
: babelplugin.c
- vmd_file_is_executable()
: vmddir.h
- VMD_FILENAME_MAX
: vmddir.h
- vmd_getuid()
: babelplugin.c
- vmd_opendir()
: vmddir.h
- VMD_PI
: qmplugin.h
- vmd_readdir()
: vmddir.h
- VMDCON_ALL
: vmdconio.h
- VMDCON_INFO
: vmdconio.h
- VMDEXTERNSTATIC
: inthash.h, hash.h
- VMDPLUGIN
: vmdplugin.h
- vmdplugin_ABIVERSION
: vmdplugin.h
- VMDPLUGIN_API
: vmdplugin.h
- VMDPLUGIN_ERROR
: vmdplugin.h
- VMDPLUGIN_EXTERN
: vmdplugin.h
- VMDPLUGIN_fini
: xyzplugin.c, xsfplugin.C, xbgfplugin.C, webpdbplugin.c, vtkplugin.C, vtfplugin.c, vaspxmlplugin.c, vaspxdatcarplugin.c, vaspposcarplugin.c, vaspparchgplugin.c, vaspoutcarplugin.c, vaspchgcarplugin.c, vasp5xdatcarplugin.c, uhbdplugin.C, tprplugin.C, tngplugin.C, tinkerplugin.c, stlplugin.C, spiderplugin.C, situsplugin.C, rst7plugin.c, raster3dplugin.C, qcschemaplugin.c, psfplugin.c, pqrplugin.c, plyplugin.C, pltplugin.C, phiplugin.C, pdbxplugin.C, pdbplugin.c, pbeqplugin.C, parmplugin.C, parm7plugin.C, orcaplugin.C, offplugin.C, netcdfplugin.c, namdbinplugin.c, msmsplugin.C, molemeshplugin.C, moldenplugin.c, mol2plugin.C, mmcif.C, mdfplugin.C, mapplugin.C, lmplugin.C, lammpsyamlplugin.c, lammpsplugin.c, jsplugin.c, hoomdplugin.c, gromacsplugin.C, gridplugin.C, grdplugin.C, graspplugin.C, gaussianplugin.c, gamessplugin.c, fs4plugin.C, edmplugin.C, dxplugin.C, dsn6plugin.C, dlpolyplugin.c, dcdplugin.c, cubeplugin.C, crdplugin.c, cpmdplugin.c, cpmdlogplugin.c, corplugin.c, ccp4plugin.C, carplugin.c, brixplugin.C, biomoccaplugin.C, binposplugin.c, bgfplugin.C, basissetplugin.c, babelplugin.c, avsplugin.C, amiraplugin.C, abinitplugin.c, vmdplugin.h
- vmdplugin_HEAD
: vmdplugin.h
- VMDPLUGIN_init
: xyzplugin.c, xsfplugin.C, xbgfplugin.C, webpdbplugin.c, vtkplugin.C, vtfplugin.c, vaspxmlplugin.c, vaspxdatcarplugin.c, vaspposcarplugin.c, vaspparchgplugin.c, vaspoutcarplugin.c, vaspchgcarplugin.c, vasp5xdatcarplugin.c, uhbdplugin.C, tprplugin.C, tngplugin.C, tinkerplugin.c, stlplugin.C, spiderplugin.C, situsplugin.C, rst7plugin.c, raster3dplugin.C, qcschemaplugin.c, psfplugin.c, pqrplugin.c, plyplugin.C, pltplugin.C, phiplugin.C, pdbxplugin.C, pdbplugin.c, pbeqplugin.C, parmplugin.C, parm7plugin.C, orcaplugin.C, offplugin.C, netcdfplugin.c, namdbinplugin.c, msmsplugin.C, molemeshplugin.C, moldenplugin.c, mol2plugin.C, mmcif.C, mdfplugin.C, mapplugin.C, lmplugin.C, lammpsyamlplugin.c, lammpsplugin.c, jsplugin.c, hoomdplugin.c, gromacsplugin.C, gridplugin.C, grdplugin.C, graspplugin.C, gaussianplugin.c, gamessplugin.c, fs4plugin.C, edmplugin.C, dxplugin.C, dsn6plugin.C, dlpolyplugin.c, dcdplugin.c, cubeplugin.C, crdplugin.c, cpmdplugin.c, cpmdlogplugin.c, corplugin.c, ccp4plugin.C, carplugin.c, brixplugin.C, biomoccaplugin.C, binposplugin.c, bgfplugin.C, basissetplugin.c, babelplugin.c, avsplugin.C, amiraplugin.C, abinitplugin.c, vmdplugin.h
- VMDPLUGIN_register
: xyzplugin.c, xsfplugin.C, xbgfplugin.C, webpdbplugin.c, vtkplugin.C, vtfplugin.c, vaspxmlplugin.c, vaspxdatcarplugin.c, vaspposcarplugin.c, vaspparchgplugin.c, vaspoutcarplugin.c, vaspchgcarplugin.c, vasp5xdatcarplugin.c, uhbdplugin.C, tprplugin.C, tngplugin.C, tinkerplugin.c, stlplugin.C, spiderplugin.C, situsplugin.C, rst7plugin.c, raster3dplugin.C, qcschemaplugin.c, psfplugin.c, pqrplugin.c, plyplugin.C, pltplugin.C, phiplugin.C, pdbxplugin.C, pdbplugin.c, pbeqplugin.C, parmplugin.C, parm7plugin.C, orcaplugin.C, offplugin.C, netcdfplugin.c, namdbinplugin.c, msmsplugin.C, molemeshplugin.C, moldenplugin.c, mol2plugin.C, mmcif.C, mdfplugin.C, mapplugin.C, lmplugin.C, lammpsyamlplugin.c, lammpsplugin.c, jsplugin.c, hoomdplugin.c, gromacsplugin.C, gridplugin.C, grdplugin.C, graspplugin.C, gaussianplugin.c, gamessplugin.c, fs4plugin.C, edmplugin.C, dxplugin.C, dsn6plugin.C, dlpolyplugin.c, dcdplugin.c, cubeplugin.C, crdplugin.c, cpmdplugin.c, cpmdlogplugin.c, corplugin.c, ccp4plugin.C, carplugin.c, brixplugin.C, biomoccaplugin.C, binposplugin.c, bgfplugin.C, basissetplugin.c, babelplugin.c, avsplugin.C, amiraplugin.C, abinitplugin.c, vmdplugin.h
- vmdplugin_register_cb
: vmdplugin.h
- VMDPLUGIN_register_tcl
: vmdplugin.h
- VMDPLUGIN_STATIC
: tprplugin.C, pdbxplugin.C, mdfplugin.C, lammpsyamlplugin.c, lammpsplugin.c, jsplugin.c
- VMDPLUGIN_SUCCESS
: vmdplugin.h
- VMDPLUGIN_THREADSAFE
: vmdplugin.h
- VMDPLUGIN_THREADUNSAFE
: vmdplugin.h
- VMDUSECONECTRECORDS
: readpdb.h
- vsfplugin
: vtfplugin.c
- vtf_close_file_read()
: vtfplugin.c
- vtf_create_atoms_as_needed()
: vtfplugin.c
- vtf_error()
: vtfplugin.c
- vtf_getline()
: vtfplugin.c
- vtf_lineno
: vtfplugin.c
- VTF_MOLFILE
: vtfplugin.c
- vtf_open_file_read()
: vtfplugin.c
- vtf_parse_aid_specifier()
: vtfplugin.c
- vtf_parse_atom()
: vtfplugin.c
- vtf_parse_bond()
: vtfplugin.c
- vtf_parse_pbc()
: vtfplugin.c
- vtf_parse_structure()
: vtfplugin.c
- vtf_parse_timestep()
: vtfplugin.c
- vtf_read_bonds()
: vtfplugin.c
- vtf_read_next_timestep()
: vtfplugin.c
- vtf_read_structure()
: vtfplugin.c
- VTF_USERDATA
: vtfplugin.c
- VTFFILE
: vtfplugin.c
- vtfplugin
: vtfplugin.c
- vtkgets()
: vtkplugin.C
- vtkgetstrcmp()
: vtkplugin.C
- vtkplugin
: vtkplugin.C
- w -
- x -
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1.2.14 written by Dimitri van Heesch,
© 1997-2002