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namdbinplugin.c File Reference

#include <stdlib.h>
#include <stdio.h>
#include <string.h>
#include <limits.h>
#include "molfile_plugin.h"

Go to the source code of this file.

Compounds
struct	namdbinhandle
Defines
#define	BLOCK   500
Functions
void *	open_namdbin_read (const char *path, const char *filetype, int *natoms)
int	read_next_timestep (void *v, int natoms, molfile_timestep_t *ts)
void	close_file_read (void *v)
void *	open_namdbin_write (const char *path, const char *filetype, int natoms)
int	write_timestep (void *v, const molfile_timestep_t *ts)
void	close_file_write (void *v)
VMDPLUGIN_API int	VMDPLUGIN_init ()
VMDPLUGIN_API int	VMDPLUGIN_register (void *v, vmdplugin_register_cb cb)
VMDPLUGIN_API int	VMDPLUGIN_fini ()
Variables
molfile_plugin_t	plugin

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Define Documentation

#define BLOCK   500

Definition at line 33 of file namdbinplugin.c. Referenced by read_next_timestep, and write_timestep.

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Function Documentation

void close_file_read (  void *    v )  [static]

Definition at line 149 of file namdbinplugin.c. References namdbinhandle::fd. Referenced by VMDPLUGIN_init.

void close_file_write (  void *    v )  [static]

Definition at line 216 of file namdbinplugin.c. References namdbinhandle::fd. Referenced by VMDPLUGIN_init.

void* open_namdbin_read (  const char *    path, const char *    filetype, int *    natoms )  [static]

Definition at line 42 of file namdbinplugin.c. References namdbinhandle::fd, namdbinhandle::numatoms, and namdbinhandle::wrongendian. Referenced by VMDPLUGIN_init.

void* open_namdbin_write (  const char *    path, const char *    filetype, int    natoms )  [static]

Definition at line 156 of file namdbinplugin.c. References namdbinhandle::fd, and namdbinhandle::numatoms. Referenced by VMDPLUGIN_init.

int read_next_timestep (  void *    v, int    natoms, molfile_timestep_t *    ts )  [static]

Definition at line 96 of file namdbinplugin.c. References BLOCK, molfile_timestep_t::coords, namdbinhandle::fd, MOLFILE_ERROR, namdbinhandle::numatoms, namdbinhandle::wrongendian, and namdbinhandle::xyz. Referenced by VMDPLUGIN_init.

VMDPLUGIN_API int VMDPLUGIN_fini (  void    )

Definition at line 254 of file namdbinplugin.c. References VMDPLUGIN_API, and VMDPLUGIN_SUCCESS.

VMDPLUGIN_API int VMDPLUGIN_init (  void    )

Definition at line 229 of file namdbinplugin.c. References close_file_read, molfile_plugin_t::close_file_read, close_file_write, molfile_plugin_t::close_file_write, molfile_plugin_t::filename_extension, MOLFILE_PLUGIN_TYPE, molfile_plugin_t::open_file_read, molfile_plugin_t::open_file_write, open_namdbin_read, open_namdbin_write, read_next_timestep, molfile_plugin_t::read_next_timestep, vmdplugin_ABIVERSION, VMDPLUGIN_API, VMDPLUGIN_SUCCESS, VMDPLUGIN_THREADSAFE, write_timestep, and molfile_plugin_t::write_timestep.

VMDPLUGIN_API int VMDPLUGIN_register (  void *    v, vmdplugin_register_cb    cb )

Definition at line 249 of file namdbinplugin.c. References VMDPLUGIN_API, vmdplugin_register_cb, and VMDPLUGIN_SUCCESS.

int write_timestep (  void *    v, const molfile_timestep_t *    ts )  [static]

Definition at line 179 of file namdbinplugin.c. References BLOCK, molfile_timestep_t::coords, namdbinhandle::fd, MOLFILE_ERROR, namdbinhandle::numatoms, and namdbinhandle::xyz. Referenced by VMDPLUGIN_init.

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Variable Documentation

molfile_plugin_t plugin [static]

Definition at line 227 of file namdbinplugin.c.

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