VMD-L Mailing List

From: Arun Krishnan (drarunkrishnan_at_gmail.com)
Date: Wed Jun 20 2007 - 23:39:21 CDT

Thanks John.

That does work!

Cheers,

Arun

On 6/21/07, John Stone <johns_at_ks.uiuc.edu> wrote:
>
>
> Arun,
> Use the "user" field rather than beta. As you discovered, the
> "beta" field currently applies to all frames. The "user" field
> is frame-specific.
>
> Cheers,
> John Stone
> vmd_at_ks.uiuc.edu
>
> On Thu, Jun 21, 2007 at 12:08:17PM +0900, Arun Krishnan wrote:
> > Hi All,
> >
> > I need to change the beta values for each frame of a trajectory.
> Currently,
> > I find that setting the beta value for one frame, sets it for all the
> other
> > frames too. I guess
> > that one way to do it is to split the trajectory into separate PDB files
> and
> > load each file as a new molecule and then set the beta values
> separately.
> > However,
> > I also need to visualize these changes as a movie. In this case I don't
> > think I can do that can I? Would sure appreciate some help on this.
> >
> > Thanks,
> >
> > Arun
>
> --
> NIH Resource for Macromolecular Modeling and Bioinformatics
> Beckman Institute for Advanced Science and Technology
> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
>