VMD-L Mailing List

From: John Eargle (eargle_at_uiuc.edu)
Date: Fri May 18 2007 - 11:32:51 CDT

It depends on how your sequence data is formatted. Help with formatdb is available here: http://web.csb.ias.edu/blast/formatdb.txt

~John Eargle

---- Original message ----
>Date: Thu, 17 May 2007 18:48:01 -0500
>From: Armen Nalian <nalianarmen_at_sfasu.edu>
>Subject: vmd-l: custom db in Multiseq
>To: vmd-l_at_ks.uiuc.edu
>
>Hello,
>I would like to use a custom database for blast search in Multiseq. How
>can I format a sequence file? What arguments are required for formatdb?
>Thank you,
>Armen
>