From: amit dong (
Date: Tue Apr 24 2007 - 10:58:13 CDT

Hi VMD community,
Is there any way I can calculate total number of H-bonds in a pdb file. I
know I can visulaize them and count them manually, but is there any other
method. Even "measure h-bond" measures h-bonds between 2 selections. But
here I want total H-bonds in a protein.
Any help will be much appreciated.