VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Dec 15 2006 - 23:44:27 CST

Hi,
  Try out the sscache script, it'll do what you have in mind:
http://www.ks.uiuc.edu/Research/vmd/script_library/scripts/sscache/

  John Stone
  vmd_at_ks.uiuc.edu

On Fri, Dec 15, 2006 at 11:47:23PM -0500, Guo Zhi wrote:
> Dear all vmd users,
>
> My friends and I all find a similar problem that vmd seems to
> render the same secondary structure of a peptide according to the last
> frame judgement during loading the trajectory. Sometimes, this can
> cause illusions if you simply make evaluations based on the movie. My
> question is, is it possible to call STRIDE for each frame and force
> VMD to update the secondary structure rendering immediately.
>
> My current VMD version is 1.8.5
> Running under Debain Linux 2.6.17-2-686
>
> Thanks. 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
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