VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Fri Nov 17 2006 - 13:37:26 CST

Nuno,
  Whether or not modifying the STRIDE source will help depends a lot
on the structure. I've seen a few structures now that STRIDE simply
won't handle unless they are processed in some sort of piecewise manner...

  John

On Fri, Nov 17, 2006 at 06:43:03PM +0000, nunolf_at_ci.uc.pt wrote:
> Hi Sathyapriya
>
> I think the problem is on the maximum number of atoms STRIDE can deal. But then,
> you just need to re-compile the stride source and you're done. If I'm not
> mistaken, there's already a thread on vmd mailing list talking about this
> subject, and if I'm not mistaken, J. Stone already increased the max. default
> atoms on the stride source code once.
>
> Nuno 

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NIH Resource for Macromolecular Modeling and Bioinformatics
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